Methylocaldum species 14B |
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Putative Methylocaldum species 14B RM systems
Ref: Wei,X. and Yu,Z. unpublished
REBASE ref # 23977
Contig set: 5,621,438 bp
GenBank #: MSCV00000000 (NZ_MSCV00000000)
REBASE acronym: Msp14B
Org_num: 23822
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 43 | Cell filamentation protein Fic | |||
| 49 | M | M.CspKK10ORF24420P (85% identity) | M.Msp14BORFGP | |
| 57 | S | S1.MkoMY1ORF225P (56% identity) | S.Msp14BORFGP | |
| 61 | Cell filamentation protein Fic | |||
| 62 | 102 aa hypothetical protein | |||
| 63 | 109 aa hypothetical protein | |||
| 64 | 108 aa hypothetical protein | |||
| 66 | R | Psp8BORF1062P (90% identity) | Msp14BORFGP | |
| 78 | Predicted metal-dependent hydrolase | |||
| 126 | 74 aa hypothetical protein | |||
| 127 | M | M.MfiC10ORFGP (75% identity) | M.Msp14BORFJP | |
| 133 | S | S.PspSXM1ORF12005P (44% identity) | S.Msp14BORFJP | |
| 135 | R | MfiC10ORFGP (87% identity) | Msp14BORFJP | |
| 142 | 129 aa hypothetical protein | |||
| 324 | 72 aa hypothetical protein | |||
| 326 | R | PseD7DORF250P (59% identity) | Msp14BORFHP | |
| 333 | M | M.BmuBHVORF522P (73% identity) | M.Msp14BORFHP | |
| 338 | S | S.BceYG3ORF40P (33% identity) | S.Msp14BORFHP | |
| 341 | Restriction endonuclease | |||
| 492 | 70 aa hypothetical protein | |||
| 494 | M | M.Mko45383ORF18845P (88% identity) | M.Msp14BORFBP | |
| 500 | S | S.Eho446ORF18185P (51% identity) | S.Msp14BORFBP | |
| 502 | Uncharacterized protein | |||
| 503 | 180 aa hypothetical protein | |||
| 504 | R | Bdi1132ORF22000P (74% identity) | Msp14BORFBP | |
| 512 | 183 aa hypothetical protein | |||
| 601 | 93 aa hypothetical protein | |||
| 603 | R | Mmi2070ORFGP (84% identity) | Msp14BORFAP | |
| 613 | M | M.DfaZXC1ORF9165P (77% identity) | M.Msp14BORFAP | |
| 617 | S | S.CspD384ORFDP (53% identity) | S.Msp14BORFAP | |
| 623 | uncharacterized protein | |||
| 869 | 162 aa hypothetical protein | |||
| 875 | M | M.PspSCADCORF205255P (79% identity) | M.Msp14BORFCP | |
| 880 | S | S.DbaSRB1ORF1440P (47% identity) | S.Msp14BORFCP | |
| 883 | Uncharacterized protein | |||
| 884 | 66 aa hypothetical protein | |||
| 885 | 70 aa hypothetical protein | |||
| 886 | DNA polymerase, beta-like region | |||
| 887 | 68 aa hypothetical protein | |||
| 888 | 85 aa hypothetical protein | |||
| 889 | 89 aa hypothetical protein | |||
| 890 | 61 aa hypothetical protein | |||
| 891 | Uncharacterized protein | |||
| 892 | 85 aa hypothetical protein | |||
| 893 | 78 aa hypothetical protein | |||
| 894 | 77 aa hypothetical protein | |||
| 896 | R | CbaCRORF2434P (74% identity) | Msp14BORFCP | |
| 904 | 59 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 30 | type II toxin-antitoxin system VapC family toxin | |||
| 33 | RM | Msp95ORFHP (72% identity) | Msp14BORFKP | |
| 44 | 177 aa hypothetical protein | |||
| 125 | 64 aa hypothetical protein | |||
| 126 | M | M.Jag9628ORF4256P (53% identity) | M.Msp14BORFIP | |
| 131 | V | V.BspMSh2ORFAP (52% identity) | V.Msp14BORFIP | |
| 133 | Transposase | |||
| 528 | RNA polymerase subunit sigma | |||
| 532 | M | M2.SfoJG42ORFCP (82% identity) | M.Msp14BORFFP | |
| 542 | 137 aa hypothetical protein | |||
| 584 | 189 aa hypothetical protein | |||
| 585 | R | MspMc7ORF8940P (79% identity) | Msp14BORFDP | |
| 588 | M | M.MspMc7ORF8940P (87% identity) | M.Msp14BORFDP | |
| 593 | 125 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 78 | Predicted metal-dependent hydrolase | |||
| 84 | R | Aal14366McrBP (71% identity) | Msp14BMcrBP | |
| 93 | R | CmeDMcrC2P (77% identity) | Msp14BMcrCP | |
| 94 | 147 aa hypothetical protein | |||
| 340 | 111 aa hypothetical protein | |||
| 341 | R | RspGA33MrrP (72% identity) | Msp14BMrrP | |
| 343 | Restriction endonuclease | |||
| 341 | Restriction endonuclease | |||
| 343 | R | Aba2719Mrr2P (47% identity) | Msp14BMrr2P | |
| 347 | 78 aa hypothetical protein | |||