Brachyspira hampsonii NSH-16 |
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Putative Brachyspira hampsonii NSH-16 RM systems
Ref: Mirajkar,N.S. and Gebhart,C.J. unpublished
REBASE ref # 24814
Complete sequence: 3,189,639 bp
GenBank #: CP019914
REBASE acronym: BhaNSH16
Org_num: 25188
All begin BHAMNSH16_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 700 | YggS family pyridoxal phosphate enzyme | |||
| 705 | S | S2.BhaNSH16ORF745P (64% identity) | S1.BhaNSH16ORF745P | |
| 710 | R | BhyWAORF436P (79% identity) | BhaNSH16ORF745P | |
| 715 | 175 aa hypothetical protein | |||
| 720 | S | S1.BhaNSH16ORF745P (64% identity) | S2.BhaNSH16ORF745P | |
| 725 | DNA polymerase subunit beta | |||
| 730 | nucleotidyltransferase | |||
| 735 | 98 aa hypothetical protein | |||
| 740 | nucleotidyltransferase | |||
| 745 | M | M.BhyWAORF436P (91% identity) | M.BhaNSH16ORF745P | |
| 750 | LacI family transcriptional regulator | |||
| 6050 | restriction endonuclease subunit S | |||
| 6055 | M | M.BpiWesBORF2364P (74% identity) | M.BhaNSH16ORF6055P | |
| 6060 | transcriptional regulator | |||
| 6065 | 93 aa hypothetical protein | |||
| 6070 | 95 aa hypothetical protein | |||
| 6075 | 111 aa hypothetical protein | |||
| 6080 | S | S.AbuCR42ORFBP (37% identity) | S.BhaNSH16ORF6055P | |
| 6085 | R | CcoS2ORF3375P (37% identity) | BhaNSH16ORF6055P | |
| 6090 | metal-dependent hydrolase | |||
| 9780 | 0 aa hypothetical protein | |||
| 9785 | R | Csp13003ORF246P (49% identity) | BhaNSH16ORF9800P | |
| 9790 | 565 aa hypothetical protein | |||
| 9795 | S | S3.PmeBin16ORFEP (27% identity) | S.BhaNSH16ORF9800P | |
| 9800 | M | M.LspHIORF34770P (53% identity) | M.BhaNSH16ORF9800P | |
| 9805 | phosphoribosyltransferase | |||
| 12265 | DNA helicase | |||
| 12270 | S | S.CjapsORFCP (27% identity) | S.BhaNSH16ORF12270P | |
| 12275 | ferritin | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1485 | modification methylase | |||
| 1490 | R | BinAORF1174P (97% identity) | BhaNSH16ORF1485P | |
| 1495 | 605 aa hypothetical protein | |||
| 2515 | 248 aa hypothetical protein | |||
| 2520 | RM | Hpy328ORF4190P (55% identity) | BhaNSH16ORF2520P | |
| 2525 | 169 aa hypothetical protein | |||
| 6250 | aminopeptidase | |||
| 6255 | RM | BmuSORF1744P (90% identity) | BhaNSH16ORF6255P | |
| 6260 | 65 aa hypothetical protein | |||
| 7100 | histidine kinase | |||
| 7105 | M | M.Hsp5293ORF1480P (63% identity) | M.BhaNSH16ORF7105P | |
| 7110 | 0 aa hypothetical protein | |||
| 7895 | terminase | |||
| 7900 | M | M.Bpi2904ORF1968P (90% identity) | M.BhaNSH16ORF7900P | |
| 7905 | adenine methyltransferase | |||
| 8675 | 74 aa hypothetical protein | |||
| 8680 | RM | Bpi2904ORF2558P (80% identity) | BhaNSH16ORF8680P | |
| 8685 | 66 aa hypothetical protein | |||
| 10405 | 251 aa hypothetical protein | |||
| 10410 | M | M.Bhy9ORF4880P (98% identity) | M.BhaNSH16ORF10410P | |
| 10415 | 1342 aa hypothetical protein | |||
| 10525 | nitroreductase family protein | |||
| 10530 | M | M.Bhy9ORF4765P (85% identity) | M.BhaNSH16ORF10530P | |
| 10535 | 183 aa hypothetical protein | |||
| 11040 | methyltransferase | |||
| 11045 | RM | BmuSORF1892P (90% identity) | BhaNSH16ORF11045P | |
| 11050 | 575 aa hypothetical protein | |||
| 11270 | 60 aa hypothetical protein | |||
| 11275 | M | M.Bhy743ORF11840P (95% identity) | M.BhaNSH16ORF11275P | |
| 11280 | GMP synthetase | |||
| 13740 | sugar kinase | |||
| 13745 | M | M.Bhy1ORF540P (93% identity) | M.BhaNSH16ORF13745P | |
| 13750 | serine protease | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3000 | chemotaxis protein | |||
| 3005 | M | M.BinAORF802P (60% identity) | M.BhaNSH16ORF3005P | |
| 3010 | R | 897 aa hypothetical protein | BhaNSH16ORF3005P | |
| 3015 | 370 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7350 | 366 aa hypothetical protein | |||
| ??? | R | Bhy375McrBP (71% identity) | BhaNSH16McrBP | |
| 7360 | R | Bhy9McrCP (72% identity) | BhaNSH16McrCP | |
| 7365 | 387 aa hypothetical protein | |||
| 8580 | 190 aa hypothetical protein | |||
| 8585 | R | BmuSMcrB3P (45% identity) | BhaNSH16McrB3P | |
| 8590 | R | Bpi1268McrCP (67% identity) | BhaNSH16McrC3P | |
| 8595 | trans-2-enoyl-CoA reductase | |||
| 9170 | tetrapyrrole methylase | |||
| 9175 | R | BinAMrrP (85% identity) | BhaNSH16MrrP | |
| 9180 | BspA family leucine-rich repeat surface protein | |||
| 10750 | 199 aa hypothetical protein | |||
| 10755 | R | Bpi2904McrBP (77% identity) | BhaNSH16McrB2P | |
| 10760 | R | restriction endonuclease | BhaNSH16McrC2P | |
| 10765 | S26 family signal peptidase | |||