Vibrio anguillarum 87-9-116 |
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Putative Vibrio anguillarum 87-9-116 RM systems
Ref: Holm,K.O. et al. unpublished
REBASE ref # 24787
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,130,467 bp | CP021980 |
| chromosome 2: | 1,207,658 bp | CP021981 |
REBASE acronym: Van9116
Org_num: 25058
All begin CEA93_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 2415 | 245 aa hypothetical protein | |||
| 2420 | S | S.VanVA1ORF12185P (100% identity) | S.Van9116ORF2425P | |
| 2425 | M | M.VanNB10ORF403P (15% identity) | M.Van9116ORF2425CP | |
| ??? | M | M.Van68554ORF11835BP (100% identity) | M.Van9116ORF2425BP | |
| 2430 | IS3 family transposase | |||
| 2435 | M | M.VanVA1ORF12185P (99% identity) | M.Van9116ORF2425AP | |
| 2440 | 132 aa hypothetical protein | |||
| 2445 | 49 aa hypothetical protein | |||
| 2450 | elongation factor Ts | |||
| 2455 | 68 aa hypothetical protein | |||
| 2460 | 94 aa hypothetical protein | |||
| 2465 | DNA methylase N-4 | |||
| 2470 | abortive phage infection protein | |||
| ??? | R | VanVA1ORF12185P (100% identity) | Van9116ORF2425P | |
| 2480 | 0 aa hypothetical protein | |||
| 4170 | restriction endonuclease | |||
| 4175 | R | VanVA1ORF10565P (100% identity) | TGANNNNNNNNTTGG | Van9116IIP |
| ??? | S | S.Van60181ORF10255P (100% identity) | TGANNNNNNNNTTGG | S.Van9116II |
| 4185 | chromosome segregation protein SMC | |||
| 4190 | 291 aa hypothetical protein | |||
| ??? | M | M.VanT265ORF10575P (100% identity) | TGANNNNNNNNTTGG | M.Van9116II |
| 4200 | integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 2460 | 94 aa hypothetical protein | |||
| 2465 | M | M.VanE2R4ORF12140P (100% identity) | M.Van9116ORF2465P | |
| 2470 | abortive phage infection protein | |||
| 8940 | 95 aa hypothetical protein | |||
| 8945 | M | M.VanVA1ORF17830P (100% identity) | M.Van9116ORF8945P | |
| 8950 | 85 aa hypothetical protein | |||
| 12965 | ribulose-phosphate 3-epimerase | |||
| 12970 | M | M.VanVIB12DamP (100% identity) | M.Van9116DamP | |
| 12975 | cell division protein DamX | |||
| chromosome 2 | ||||
| 16365 | 69 aa hypothetical protein | |||
| 16370 | M | M.VanNB10ORF337P (100% identity) | M.Van9116ORF16370P | |
| 16375 | R | VanNB10ORF337P (100% identity) | Van9116ORF16370P | |
| 16380 | S-adenosylhomocysteine hydrolase | |||
| 18115 | DUF262 domain-containing protein | |||
| 18120 | RM | VanNB10ORF633P (100% identity) | CCKAAG | Van9116I |
| 18125 | 1157 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 4165 | DNA-binding protein | |||
| 4170 | R | VanVA1MrrP (100% identity) | Van9116MrrP | |
| 4175 | restriction endonuclease subunit R | |||