Salmonella enterica subsp. enterica serovar India SA20085604 |
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Putative Salmonella enterica subsp. enterica serovar India SA20085604 RM systems
Ref: Robertson,J. et al. unpublished
REBASE ref # 26013
| Sequence length: | GenBank #: | |
| Chromosome: | 5,395,280 bp | CP022015 |
| plasmid unnamed1: | 473,456 bp | CP022016 |
REBASE acronym: Sen5604
Org_num: 24885
All begin LFZ16_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 675 | 95 aa hypothetical protein | |||
| 680 | S | S.Kpn1046ORF27240P (53% identity) | S.Sen5604ORF680P | |
| 685 | 134 aa hypothetical protein | |||
| 3575 | IS30 family transposase | |||
| 3580 | M | M.Sen5604ORF16935P (98% identity) | M.Sen5604ORF3580P | |
| 3585 | S | S.Sen5604ORF16935P (67% identity) | S.Sen5604ORF3580P | |
| 3590 | R | Sen5604ORF16935P (100% identity) | Sen5604ORF3580P | |
| 3595 | 376 aa hypothetical protein | |||
| 13645 | 123 aa hypothetical protein | |||
| 13650 | R | Eco9047IP (82% identity) | Sen5604ORF13655P | |
| 13655 | M | M.KmiSb24ORF21905P (93% identity) | M.Sen5604ORF13655P | |
| 13660 | S | type I restriction endonuclease subunit S | S1.Sen5604ORF13655P | |
| 13665 | IS5/IS1182 family transposase | |||
| 13670 | S | S.Cfr477ORF19330P (56% identity) | S2.Sen5604ORF13655P | |
| 13675 | 118 aa hypothetical protein | |||
| 16920 | 379 aa hypothetical protein | |||
| 16925 | R | Sen5604ORF3580P (100% identity) | Sen5604ORF16935P | |
| 16930 | S | S.Sen5604ORF3580P (67% identity) | S.Sen5604ORF16935P | |
| 16935 | M | M.Sen5604ORF3580P (98% identity) | M.Sen5604ORF16935P | |
| 16940 | IS30 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1140 | 109 aa hypothetical protein | |||
| 1145 | M | M.Ssp6947ORF1252P (94% identity) | M.Sen5604ORF1145P | |
| 1150 | 101 aa hypothetical protein | |||
| 11375 | 79 aa hypothetical protein | |||
| 11380 | M | M1.Sen44923ORF14090P (88% identity) | M.Sen5604ORF11380P | |
| 11385 | 81 aa hypothetical protein | |||
| 16615 | 320 aa hypothetical protein | |||
| 16620 | M | M.Sen7349ORF772P (100% identity) | M.Sen5604ORF16620P | |
| 16625 | 82 aa hypothetical protein | |||
| 16805 | 79 aa hypothetical protein | |||
| 16810 | M | M.Sen6241ORF3730P (100% identity) | M.Sen5604ORF16810P | |
| 16815 | R | Sen6241ORF3730P (100% identity) | Sen5604ORF16810P | |
| 16820 | 256 aa hypothetical protein | |||
| 18820 | ribulose-phosphate 3-epimerase | |||
| 18825 | M | M.StyTDamP (100% identity) | GATC | M.Sen5604DamP |
| 18830 | cell division protein DamX | |||
| 22665 | DUF2556 domain-containing protein | |||
| 22670 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen5604ORF22670P |
| 22675 | Fis family transcriptional regulator | |||
| 25375 | integrase | |||
| 25380 | R | SenFC745DptFP (100% identity) | Sen5604DptFP | |
| 25385 | DNA phosphorothioation-dependent restriction | |||
| 25380 | DNA phosphorothioation-dependent restriction | |||
| 25385 | R | SenFC745DptGP (100% identity) | Sen5604DptGP | |
| 25390 | DNA phosphorothioation-dependent restriction | |||
| 25385 | DNA phosphorothioation-dependent restriction | |||
| 25390 | R | Sen7378DptHP (99% identity) | Sen5604DptHP | |
| 25395 | restriction endonuclease | |||
| 25400 | 397 aa hypothetical protein | |||
| 25405 | M | M.SenB82DndEP (100% identity) | M.Sen5604DndEP | |
| 25410 | DNA sulfur modification protein DndD | |||
| 25405 | DNA sulfur modification protein DndE | |||
| 25410 | M | M.SenB82DndDP (100% identity) | M.Sen5604DndDP | |
| 25415 | 544 aa hypothetical protein | |||
| 25410 | DNA sulfur modification protein DndD | |||
| 25415 | M | M.SenB82DndCP (100% identity) | M.Sen5604DndCP | |
| 25420 | DNA sulfur modification protein DndB | |||
| 25415 | 544 aa hypothetical protein | |||
| 25420 | M | M.SenB82DndBP (100% identity) | M.Sen5604DndBP | |
| 25425 | 70 aa hypothetical protein | |||
| plasmid unnamed1 | ||||
| 28770 | 77 aa hypothetical protein | |||
| 28775 | M | M.Sens29945ORF12870P (99% identity) | M.Sen5604ORF28775P | |
| 28780 | 59 aa hypothetical protein | |||
| 29405 | amino acid exporter | |||
| 29410 | V | V.StyUK1DcmP (100% identity) | V.Sen5604DcmP | |
| 29415 | M | M.SenC626DcmP (100% identity) | CCWGG | M.Sen5604DcmP |
| 29420 | phosphohydrolase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4900 | MFS transporter | |||
| 4905 | M | M.Sens29882ORF18310P (99% identity) | CAGAG | M.Sen5604ORF4905P |
| 4910 | R | SenC626ORFAP (99% identity) | CAGAG | Sen5604ORF4905P |
| 4915 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 25395 | R | SenB82MrrP (100% identity) | Sen5604MrrP | |
| 25400 | 397 aa hypothetical protein | |||