Yersinia pestis D106004 |
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Putative Yersinia pestis D106004 RM systems
Ref: Zhang,Z. et al. Am. J. Trop. Med. Hyg. 81 (4), 714-717 (2009)
REBASE ref # 11345
| Sequence length: | GenBank #: | |
| Chromosome: | 4,640,720 bp | CP001585 |
| plasmid pMT1: | 94,249 bp | CP001587 |
REBASE acronym: Ype106004
Org_num: 5628
All begin YPD4_, YPD4_pMT
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 134 | 329 aa hypothetical protein | |||
| ??? | M | M.Ysi228DamP (100% identity) | GATC | M.Ype106004DamP |
| 136 | ribulose-phosphate 3-epimerase | |||
| 338 | 438 aa hypothetical protein | |||
| 339 | M | M.YpeZORF386P (100% identity) | CCWGG | M.Ype106004ORF339P |
| 340 | 240 aa hypothetical protein | |||
| 1843 | insertion sequence IS100, ATP-binding protein | |||
| 1844 | M | methyltransferase | TGGCCA | M.Ype106004ORF1844P |
| 1845 | phage nin-region protein | |||
| plasmid pMT1 | ||||
| 71 | DNA-binding protein | |||
| 72 | M | M.YpeZORF72P (100% identity) | M.Ype106004ORF72P | |
| 73 | 139 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 336 | transposase | |||
| 337 | R | YpeZMcrBP (100% identity) | Ype106004McrBP | |
| 338 | R | YpeZMcrCP (100% identity) | Ype106004McrCP | |
| 339 | modification methylase | |||