Salmonella enterica subsp. enterica ST1120 |
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Putative Salmonella enterica subsp. enterica ST1120 RM systems
Ref: Kim,S. et al. unpublished
REBASE ref # 24705
| Sequence length: | GenBank #: | |
| Chromosome: | 4,855,001 bp | CP021909 |
| plasmid pST1120: | 6,863 bp | CP021910 |
REBASE acronym: Sen1120
Org_num: 24806
All begin ST1120_, ST1120_1p
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 652 | toxic protein SymE | |||
| 653 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen1120ORF654P |
| 654 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen1120ORF654P |
| 655 | R | StyLT2IIP (100% identity) | GAGNNNNNNRTAYG | Sen1120ORF654P |
| 656 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 622 | 363 aa hypothetical protein | |||
| 623 | RM | StyUK1IV (100% identity) | GATCAG | Sen1120ORF623P |
| 624 | DNA repair ATPase | |||
| 2735 | inner membrane transporter YedA | |||
| 2734 | V | Very short patch repair protein | V.Sen1120DcmP | |
| 2736 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen1120DcmP |
| 2737 | phosphohydrolase | |||
| 4125 | Fis family transcriptional regulator | |||
| 4126 | M | adenine-specific DNA-methyltransferase | ATGCAT | M.Sen1120ORF4126P |
| 4127 | periplasmic protein | |||
| 4219 | ribulose-phosphate 3-epimerase | |||
| 4220 | M | DNA adenine methylase | GATC | M.Sen1120DamP |
| 4221 | Cell division protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1142 | MFS transporter | |||
| 1143 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen1120ORF1143P |
| 1144 | R | StyUK1IP (99% identity) | CAGAG | Sen1120ORF1143P |
| 1145 | cytochrome ubiquinol oxidase subunit I | |||
| plasmid pST1120 | ||||
| 1 | regulatory protein Rop | |||
| 2 | R | SenSO21ORF25170P (99% identity) | Sen1120ORF3P | |
| 3 | M | M.SenSO21ORF25170P (99% identity) | M.Sen1120ORF3P | |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 655 | type I restriction-modification system | |||
| 656 | R | StyUK1MrrP (100% identity) | Sen1120Mrr2P | |
| 657 | membrane protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3462 | replication endonuclease from prophage-like | |||
| 3463 | M | M.StyLTORF13745P (100% identity) | M.Sen1120ORF3463P | |
| 3464 | 75 aa hypothetical protein | |||