Vibrio gazogenes ATCC 43942 |
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Putative Vibrio gazogenes ATCC 43942 RM systems
Ref: Holder,M.E. et al. unpublished
REBASE ref # 24793
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,471,064 bp | CP018835 |
| chromosome 2: | 1,303,572 bp | CP018836 |
REBASE acronym: Vga43942
Org_num: 24766
All begin BSQ33_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 6935 | tRNA dihydrouridine(20/20a) synthase DusA | |||
| 6940 | R | Vpa0353ORFAP (97% identity) | GNAANNNNNNNNTGGG | Vga43942IP |
| 6945 | 318 aa hypothetical protein | |||
| 6950 | S | S.Vpa0353ORFAP (94% identity) | GNAANNNNNNNNTGGG | S.Vga43942I |
| 6955 | M | M.VpaX1ORF12865P (95% identity) | GNAANNNNNNNNTGGG | M.Vga43942I |
| 6960 | 143 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 9615 | 157 aa hypothetical protein | |||
| 9620 | RM | Pag4ORF9135P (85% identity) | CCANNNNNCTC | Vga43942II |
| 9625 | S | S.PbaOrORF7175P (39% identity) | CCANNNNNCTC | S.Vga43942II |
| 9630 | integrase | |||
| 10355 | cell division protein DamX | |||
| 10360 | M | M.VgaPB1DamP (98% identity) | GATC | M.Vga43942Dam |
| 10365 | ribulose-phosphate 3-epimerase | |||
| chromosome 2 | ||||
| 19790 | 93 aa hypothetical protein | |||
| 19795 | M | M.Vrh23790ORFDP (93% identity) | M.Vga43942ORF19795P | |
| 19800 | AraC family transcriptional regulator | |||