Yersinia ruckeri QMA0440 |
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Putative Yersinia ruckeri QMA0440 RM systems
Ref: Barnes,A.C. et al. Microb Genom 2 (11), E000095 (2016)
REBASE ref # 24676
Complete sequence: 3,856,634 bp
GenBank #: CP017236
REBASE acronym: Yru440
Org_num: 24741
All begin QMA0440_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3094 | 191 aa hypothetical protein | |||
| 3095 | S | S.Yru37551ORF3363P (100% identity) | S.Yru440ORF3095P | |
| 3096 | mRNA interferase RelE | |||
| 3108 | S | S.Yru74ORF12275P (100% identity) | S.Yru440ORF3109P | |
| 3109 | M | M.Yru74ORF12275P (100% identity) | M.Yru440ORF3109P | |
| 3110 | R | Yru74ORF12275P (100% identity) | Yru440ORF3109P | |
| 3111 | integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 147 | 326 aa hypothetical protein | |||
| 148 | M | M.YruSC09DamP (100% identity) | M.Yru440DamP | |
| 149 | ribulose-phosphate 3-epimerase | |||
| 1172 | 61 aa hypothetical protein | |||
| 1173 | M | M.Yru37551ORF2358P (100% identity) | M.Yru440ORF1173P | |
| 1174 | 215 aa hypothetical protein | |||
| 1998 | lipase | |||
| 1999 | M | M.Yru37551ORF1758P (100% identity) | M.Yru440ORF1999P | |
| 2000 | Antitermination protein | |||
| 2005 | Crossover junction endodeoxyribonuclease RusA | |||
| 2006 | M | M.Yru37551ORF1765P (100% identity) | M.Yru440ORF2006P | |
| 2007 | 339 aa hypothetical protein | |||
| 2474 | phage-like protein | |||
| 2475 | M | M.Yru414ORF4790P (100% identity) | M.Yru440ORF2475P | |
| 2476 | 80 aa hypothetical protein | |||
| 2543 | 298 aa hypothetical protein | |||
| 2544 | M | M.Yru440ORF2475P (99% identity) | M.Yru440ORF2544P | |
| 2545 | 80 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3103 | 122 aa hypothetical protein | |||
| 3104 | R | Yru74McrBP (100% identity) | Yru440McrBP | |
| 3105 | R | Yru37551McrCP (100% identity) | Yru440McrCP | |
| 3106 | 1100 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1444 | 118 aa hypothetical protein | |||
| 1445 | M | M.Yru37551ORF1996P (100% identity) | M.Yru440ORF1445P | |
| 1446 | 215 aa hypothetical protein | |||