Escherichia coli |
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Putative Escherichia coli RM systems
Ref: Buhk,H.J. and Messer,W. Gene 24 (2-3), 265-279 (1983)
REBASE ref # 25499
| Sequence length: | GenBank #: | |
| chromosome 1: | 4,757,668 bp | LS992171 |
| chromosome 1: | 5,137,826 bp | LS992180 |
| chromosome 1: | 4,850,393 bp | LS992166 |
| chromosome 1: | 5,302,459 bp | LS992192 |
| chromosome 1: | 4,922,897 bp | LS992185 |
| chromosome 1: | 4,830,938 bp | LR025096 |
| chromosome 1: | 5,124,666 bp | LS992190 |
| chromosome 1: | 5,323,688 bp | LR025099 |
| chromosome 1: | 5,059,899 bp | LR025101 |
| chromosome 1: | 5,031,440 bp | LS992168 |
| chromosome 1: | 4,750,815 bp | LS998785 |
| chromosome 1: | 5,024,868 bp | LS999560 |
| plasmid 2: | 103,198 bp | LS998786 |
| plasmid 2: | 172,923 bp | LS992169 |
| plasmid 2: | 164,477 bp | LS992186 |
| plasmid 2: | 149,633 bp | LS992181 |
| plasmid 2: | 128,948 bp | LS992193 |
| plasmid 2: | 133,139 bp | LS992191 |
| plasmid 3: | 99,072 bp | LS992187 |
| plasmid 3: | 86,367 bp | LS992194 |
| plasmid 3: | 102,557 bp | LS999562 |
| plasmid 3: | 133,139 bp | LS992182 |
| plasmid 3: | 27,017 bp | LS998787 |
| plasmid 4: | 96,986 bp | LS992188 |
REBASE acronym: EcoC1639
Org_num: 33403
All begin EC12536_, EC1639_, EC3426_, EC7215_, ECTO124_, ECTO143_, ECTO148_, ECTO217_, ECTO6_, ECTO60_, ECTO73_, ECTO75_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 3796 | Uncharacterised protein | |||
| 3797 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoTO143ORF3798P |
| 3798 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoTO143ORF3798P |
| 3799 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoTO143ORF3798P |
| 3802 | Uncharacterised protein | |||
| 4161 | EcoKMrr | |||
| 4162 | M | M.EcosS9ORF3165P (100% identity) | RTACNNNNGTG | M.EcoTO143ORF4162P |
| 4163 | S | S.EcosS9ORF3165P (100% identity) | RTACNNNNGTG | S.EcoTO143ORF4162P |
| 4164 | R | EcosS9ORF3165P (100% identity) | RTACNNNNGTG | EcoTO143ORF4162P |
| 4166 | endoribonuclease SymE | |||
| chromosome 1 | ||||
| 3917 | Uncharacterised protein | |||
| 3918 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoTO124ORF3919P |
| 3919 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoTO124ORF3919P |
| 3920 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoTO124ORF3919P |
| 3923 | Uncharacterised protein | |||
| 4284 | EcoKMrr | |||
| 4285 | M | M.EcosS9ORF3165P (100% identity) | RTACNNNNGTG | M.EcoTO124ORF4285P |
| 4286 | S | S.EcosS9ORF3165P (100% identity) | RTACNNNNGTG | S.EcoTO124ORF4285P |
| 4287 | R | EcosS9ORF3165P (100% identity) | RTACNNNNGTG | EcoTO124ORF4285P |
| 4289 | endoribonuclease SymE | |||
| chromosome 1 | ||||
| 2023 | Transposase | |||
| 2024 | R | EhoEh60ORF13695P (90% identity) | EcoTO6ORF2024P | |
| 2025 | Uncharacterised protein | |||
| 4123 | EcoKMrr | |||
| 4124 | R | Ecos671ORFCP (100% identity) | EcoTO6ORF4125P | |
| 4125 | M | M.SflFF12ORF17265P (100% identity) | M.EcoTO6ORF4125P | |
| 4126 | S | S.SflFF12ORF17265P (100% identity) | S.EcoTO6ORF4125P | |
| 4128 | endoribonuclease SymE | |||
| chromosome 1 | ||||
| 4035 | Uncharacterised protein | |||
| 4036 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoTO217ORF4037P |
| 4037 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoTO217ORF4037P |
| 4038 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoTO217ORF4037P |
| 4041 | Uncharacterised protein | |||
| 4402 | EcoKMrr | |||
| 4403 | M | M.EcosS9ORF3165P (100% identity) | RTACNNNNGTG | M.EcoTO217ORF4403P |
| 4404 | S | S.EcosS9ORF3165P (100% identity) | RTACNNNNGTG | S.EcoTO217ORF4403P |
| 4405 | R | EcosS9ORF3165P (100% identity) | RTACNNNNGTG | EcoTO217ORF4403P |
| 4407 | endoribonuclease SymE | |||
| chromosome 1 | ||||
| 3802 | Uncharacterised protein | |||
| 3803 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoTO60ORF3804P |
| 3804 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoTO60ORF3804P |
| 3805 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoTO60ORF3804P |
| 3808 | Uncharacterised protein | |||
| 4167 | EcoKMrr | |||
| 4168 | M | M.EcosS9ORF3165P (100% identity) | RTACNNNNGTG | M.EcoTO60ORF4168P |
| 4169 | S | S.EcosS9ORF3165P (100% identity) | RTACNNNNGTG | S.EcoTO60ORF4168P |
| 4170 | R | EcosS9ORF3165P (100% identity) | RTACNNNNGTG | EcoTO60ORF4168P |
| 4172 | endoribonuclease SymE | |||
| chromosome 1 | ||||
| 1185 | IS1 transposase | |||
| 1186 | R | Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | EcoTO75ORF1188P |
| 1187 | S | S.Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | S.EcoTO75ORF1188P |
| 1188 | M | M.SenS688ORF13495P (100% identity) | ACAYNNNNCTG | M.EcoTO75ORF1188P |
| 1189 | ParB/RepB/Spo0J family partition protein | |||
| chromosome 1 | ||||
| 1923 | Uncharacterised protein | |||
| 1924 | R | EcosEC2ORF13930P (100% identity) | Eco3426ORF1926P | |
| 1925 | S | S.EcosS1ORF17110P (100% identity) | S.Eco3426ORF1926P | |
| 1926 | M | M.EcosS1ORF17110P (100% identity) | M.Eco3426ORF1926P | |
| 1927 | GTPase Era | |||
| chromosome 1 | ||||
| 3057 | WLM domain protein | |||
| 3058 | R | EcoZ063ORF9555P (100% identity) | Eco7215ORF3061P | |
| 3059 | preprotein translocase subunit SecA | |||
| 3060 | S | S.EcoJS426ORF1170P (100% identity) | S.Eco7215ORF3061P | |
| 3061 | M | M.Kpn99ORF25615P (100% identity) | M.Eco7215ORF3061P | |
| 3062 | Transposase DDE domain protein | |||
| chromosome 1 | ||||
| 3910 | Uncharacterised protein | |||
| 3911 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoTO148ORF3912P |
| 3912 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoTO148ORF3912P |
| 3913 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoTO148ORF3912P |
| 3916 | Uncharacterised protein | |||
| 4275 | EcoKMrr | |||
| 4276 | M | M.EcosS9ORF3165P (100% identity) | RTACNNNNGTG | M.EcoTO148ORF4276P |
| 4277 | S | S.EcosS9ORF3165P (100% identity) | RTACNNNNGTG | S.EcoTO148ORF4276P |
| 4278 | R | EcosS9ORF3165P (100% identity) | RTACNNNNGTG | EcoTO148ORF4276P |
| 4280 | endoribonuclease SymE | |||
| plasmid 2 | ||||
| 4923 | IS1 transposase | |||
| 4924 | R | KpnKPH1ORF27575P (100% identity) | CAAYNNNNNNCTGG | Eco3426ORF4926P |
| 4925 | S | S.EcoS497ORF620P (100% identity) | CAAYNNNNNNCTGG | S.Eco3426ORF4926P |
| 4926 | M | M.KpnKPA1ORF26345P (100% identity) | CAAYNNNNNNCTGG | M.Eco3426ORF4926P |
| 4927 | prevent-host-death family protein | |||
| plasmid 2 | ||||
| 5090 | Transposase | |||
| 5091 | R | KpnKPH1ORF27575P (100% identity) | CAAYNNNNNNCTGG | EcoTO60ORF5093P |
| 5092 | S | S.SenceORFJP (100% identity) | CAAYNNNNNNCTGG | S.EcoTO60ORF5093P |
| 5093 | M | M.SenceORFJP (99% identity) | CAAYNNNNNNCTGG | M.EcoTO60ORF5093P |
| 5094 | prevent-host-death family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 330 | cell division protein DamX | |||
| 331 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoTO73DamP |
| 332 | Ribulose-phosphate 3-epimerase | |||
| 458 | Uncharacterised protein | |||
| 459 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.EcoTO73ORF459P |
| 460 | Hin recombinational enhancer-binding protein | |||
| 1811 | hydrolase | |||
| 1812 | M | M.EcosEC5DcmP (100% identity) | CCWGG | M.EcoTO73DcmP |
| 1813 | V | V.EcosEC7DcmP (100% identity) | V.EcoTO73DcmP | |
| 1814 | inner membrane transporter YedA | |||
| ??? | 708 aa hypothetical protein CR517_25310 | |||
| 4049 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoTO73ORF4050P |
| 4050 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoTO73ORF4050P |
| ??? | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M2.EcoTO73ORF4050P |
| 4052 | transposase/IS protein | |||
| chromosome 1 | ||||
| 94 | PglZ domain protein | |||
| 95 | RM | EcosR9ORF15335P (100% identity) | CANCATC | EcoTO124ORF95P |
| 96 | Uncharacterised protein | |||
| 403 | cell division protein DamX | |||
| 404 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoTO124DamP |
| 405 | Ribulose-phosphate 3-epimerase | |||
| 525 | Uncharacterised protein | |||
| 526 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoTO124ORF526P |
| 527 | Hin recombinational enhancer-binding protein | |||
| 2028 | hydrolase | |||
| 2029 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoTO124DcmP |
| 2030 | V | V.EcoTO148Dcm2P (100% identity) | V.EcoTO124DcmP | |
| 2031 | inner membrane transporter YedA | |||
| 2735 | pseudogene | |||
| 2738 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoTO124ORF2738P |
| 2739 | Uncharacterised protein | |||
| 3189 | HTH-type transcriptional regulator ImmR | |||
| 3190 | M | M.KpnYN1ORFGP (89% identity) | M.EcoTO124ORF3190P | |
| 3191 | Uncharacterised protein | |||
| ??? | 708 aa hypothetical protein CR517_25310 | |||
| 4355 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoTO124ORF4356P |
| 4356 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoTO124ORF4356P |
| ??? | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M2.EcoTO124ORF4356P |
| 4358 | Uncharacterised protein | |||
| chromosome 1 | ||||
| 362 | cell division protein DamX | |||
| 363 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoTO6DamP |
| 364 | Ribulose-phosphate 3-epimerase | |||
| 490 | Uncharacterised protein | |||
| 491 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.EcoTO6ORF491P |
| 492 | Hin recombinational enhancer-binding protein | |||
| 1961 | hydrolase | |||
| 1962 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoTO6DcmP |
| 1963 | V | V.SflFF64DcmP (100% identity) | V.EcoTO6DcmP | |
| 1964 | inner membrane transporter YedA | |||
| 3188 | Bacteriophage replication gene A protein (GPA) | |||
| 3189 | M | M.EcoPSS12ORF13270P (100% identity) | GATC | M.EcoTO6ORF3189P |
| 3190 | DksA-like zinc finger domain containing protein | |||
| 3545 | LexA repressor | |||
| 3546 | M | M.EcoST3ORF8625P (100% identity) | GATC | M.EcoTO6ORF3546P |
| 3547 | PerC transcriptional activator | |||
| chromosome 1 | ||||
| 345 | cell division protein DamX | |||
| 346 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoTO217DamP |
| 347 | Ribulose-phosphate 3-epimerase | |||
| 467 | Uncharacterised protein | |||
| 468 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoTO217ORF468P |
| 469 | Hin recombinational enhancer-binding protein | |||
| 1231 | PerC transcriptional activator | |||
| 1232 | M | M.SflLIN17ORF17440P (100% identity) | GATC | M.EcoTO217ORF1232P |
| 1233 | LexA repressor | |||
| 1240 | Uncharacterised protein | |||
| 1241 | M | M.EcosR6ORF7985P (100% identity) | M.EcoTO217ORF1241P | |
| 1242 | Lysis protein S | |||
| 1270 | Uncharacterised protein | |||
| 1271 | M | M.Sso8033ORF3755P (100% identity) | M.EcoTO217ORF1271P | |
| 1272 | R | Sso8033ORF3755P (99% identity) | EcoTO217ORF1271P | |
| 1273 | pseudogene | |||
| 2096 | hydrolase | |||
| 2097 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoTO217DcmP |
| 2098 | V | V.SflC32DcmP (74% identity) | V.EcoTO217DcmP | |
| 2099 | inner membrane transporter YedA | |||
| 2281 | Phage antitermination protein Q | |||
| 2282 | M | M2.EcosS3ORF2905P (100% identity) | M.EcoTO217ORF2282P | |
| 2283 | R | R2.EcosS3ORF2905P (100% identity) | EcoTO217ORF2282P | |
| 2284 | Uncharacterised protein | |||
| 2874 | pseudogene | |||
| 2877 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoTO217ORF2877P |
| 2878 | Uncharacterised protein | |||
| 3327 | HTH-type transcriptional regulator ImmR | |||
| 3328 | M | M.KpnYN1ORFGP (89% identity) | M.EcoTO217ORF3328P | |
| 3329 | Uncharacterised protein | |||
| ??? | 708 aa hypothetical protein CR517_25310 | |||
| 4470 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoTO217ORF4471P |
| 4471 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoTO217ORF4471P |
| ??? | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M2.EcoTO217ORF4471P |
| 4473 | Uncharacterised protein | |||
| 4739 | sensory histidine kinase DcuS | |||
| 4740 | M | M.EcosS3ORF15775P (100% identity) | M.EcoTO217ORF4740P | |
| 4741 | Uncharacterised protein | |||
| chromosome 1 | ||||
| 1034 | PerC transcriptional activator | |||
| 1035 | M | M.EcosNDM5ORF17680P (100% identity) | GATC | M.Eco3426ORF1035P |
| 1036 | LexA repressor | |||
| 1083 | prophage CPS-53 integrase | |||
| 1084 | M | M.EcosEC31ORF18555P (100% identity) | GGTACC | M.Eco3426ORF1084P |
| 1085 | Uncharacterised protein | |||
| 2987 | inner membrane transporter YedA | |||
| 2988 | V | V.EcosEC7DcmP (100% identity) | V.Eco3426DcmP | |
| 2989 | M | M.EcosEC7DcmP (100% identity) | CCWGG | M.Eco3426DcmP |
| 2990 | hydrolase | |||
| 3649 | PerC transcriptional activator | |||
| 3650 | M | M.Ecos154ORF1535P (98% identity) | M.Eco3426ORF3650P | |
| 3651 | Uncharacterised protein | |||
| 4414 | Hin recombinational enhancer-binding protein | |||
| 4415 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.Eco3426ORF4415P |
| 4416 | Uncharacterised protein | |||
| 4544 | Ribulose-phosphate 3-epimerase | |||
| 4545 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco3426DamP |
| 4546 | cell division protein DamX | |||
| chromosome 1 | ||||
| 1792 | NinB protein | |||
| 1793 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco7215ORF1793P |
| 1794 | Uncharacterised protein | |||
| 3113 | inner membrane transporter YedA | |||
| 3114 | V | V.SsoSE61DcmP (100% identity) | V.Eco7215DcmP | |
| 3115 | M | M.SdyFF10DcmP (100% identity) | CCWGG | M.Eco7215DcmP |
| 3116 | hydrolase | |||
| 4524 | Hin recombinational enhancer-binding protein | |||
| 4525 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco7215ORF4525P |
| 4526 | Uncharacterised protein | |||
| 4638 | Ribulose-phosphate 3-epimerase | |||
| 4639 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco7215DamP |
| 4640 | cell division protein DamX | |||
| chromosome 1 | ||||
| 100 | PglZ domain protein | |||
| 101 | RM | EcosR9ORF15335P (100% identity) | CANCATC | EcoTO148ORF101P |
| 102 | Uncharacterised protein | |||
| 409 | cell division protein DamX | |||
| 410 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoTO148DamP |
| 411 | Ribulose-phosphate 3-epimerase | |||
| 531 | Uncharacterised protein | |||
| 532 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoTO148ORF532P |
| 533 | Hin recombinational enhancer-binding protein | |||
| 2036 | hydrolase | |||
| 2037 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoTO148DcmP |
| 2038 | V | V.EcoTO148Dcm2P (100% identity) | V.EcoTO148DcmP | |
| 2039 | inner membrane transporter YedA | |||
| 2054 | hydrolase | |||
| 2055 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoTO148Dcm2P |
| 2056 | V | V.EcoTO148DcmP (100% identity) | V.EcoTO148Dcm2P | |
| 2057 | inner membrane transporter YedA | |||
| 2759 | pseudogene | |||
| 2762 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoTO148ORF2762P |
| 2763 | Uncharacterised protein | |||
| 3213 | HTH-type transcriptional regulator ImmR | |||
| 3214 | M | M.KpnYN1ORFGP (89% identity) | M.EcoTO148ORF3214P | |
| 3215 | Uncharacterised protein | |||
| ??? | 708 aa hypothetical protein CR517_25310 | |||
| 4343 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoTO148ORF4344P |
| 4344 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoTO148ORF4344P |
| ??? | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M2.EcoTO148ORF4344P |
| 4346 | Uncharacterised protein | |||
| chromosome 1 | ||||
| 621 | Uncharacterised protein | |||
| ??? | M | M.EhocolRDndEP (63% identity) | M.Eco12536DndEP | |
| 622 | recombination protein F | |||
| ??? | DNA sulfur modification protein DndE | |||
| 622 | M | M.PaqA16DndDP (35% identity) | M.Eco12536DndDP | |
| 623 | sulfurtransferase DndC | |||
| 622 | recombination protein F | |||
| 623 | M | M.Esi282DndCP (82% identity) | M.Eco12536DndCP | |
| 624 | Cysteine desulfurase | |||
| 2209 | Uncharacterised protein | |||
| 2210 | M | M.Kpn366ORF6560P (96% identity) | M.Eco12536ORF2210P | |
| 2211 | DNA polymerase III subunit theta | |||
| 2452 | Bacteriophage Lambda NinG protein | |||
| 2453 | M | M.Kpn25955ORFAP (99% identity) | M.Eco12536ORF2453P | |
| 2454 | Phage antitermination protein Q | |||
| 3412 | inner membrane transporter YedA | |||
| ??? | V | V.Kqu6DcmP (100% identity) | V.Eco12536DcmP | |
| ??? | M | M.KspC31ORFBP (100% identity) | CCWGG | M.Eco12536DcmP |
| 3415 | hydrolase | |||
| 4765 | Ribulose-phosphate 3-epimerase | |||
| 4766 | M | DNA adenine methylase | GATC | M.Eco12536DamP |
| 4767 | cell division protein DamX | |||
| chromosome 1 | ||||
| 676 | RNA polymerase-associated protein RapA | |||
| 677 | RM | Fnu048ORFEP (100% identity) | EcoC1639ORF677P | |
| 1056 | Integrase | |||
| 1057 | M | M.Fnu048DndBP (98% identity) | M.EcoC1639DndBP | |
| 1058 | sulfurtransferase DndC | |||
| 1057 | DNA sulfur modification protein DndB | |||
| 1058 | M | M.Fnu048DndCP (100% identity) | M.EcoC1639DndCP | |
| 1059 | DNA sulfur modification protein DndD | |||
| 1058 | sulfurtransferase DndC | |||
| 1059 | M | M.Fnu048DndDP (100% identity) | M.EcoC1639DndDP | |
| 1060 | DNA sulfur modification protein DndE | |||
| 1059 | DNA sulfur modification protein DndD | |||
| 1060 | M | M.Fnu048DndEP (100% identity) | M.EcoC1639DndEP | |
| 1061 | DNA phosphorothioation-associated DGQHR protein | |||
| 1062 | Uncharacterised protein | |||
| 1063 | R | Fnu048DptHP (100% identity) | EcoC1639DptHP | |
| 1064 | DNA phosphorothioation-dependent restriction | |||
| 1063 | DNA phosphorothioation-dependent restriction | |||
| 1064 | R | Fnu048DptGP (100% identity) | EcoC1639DptGP | |
| 1065 | DNA phosphorothioation-dependent restriction | |||
| 1064 | DNA phosphorothioation-dependent restriction | |||
| 1065 | R | Fnu048DptFP (100% identity) | EcoC1639DptFP | |
| 1066 | transcriptional regulator, y4mF family | |||
| 2108 | Uncharacterised protein | |||
| 2109 | M | M.EcoDEC13EORF792P (100% identity) | M.EcoC1639ORF2109P | |
| 2110 | Uncharacterised protein | |||
| 2126 | Uncharacterised protein | |||
| 2127 | M | M.Fnu048ORFFP (100% identity) | A | M.EcoC1639ORF2127P |
| 2130 | pseudogene | |||
| 2895 | inner membrane transporter YedA | |||
| 2896 | V | V.Fnu048DcmP (100% identity) | V.EcoC1639DcmP | |
| 2897 | M | M.Fnu048DcmP (100% identity) | CCWGG | M.EcoC1639DcmP |
| 2898 | hydrolase | |||
| 4398 | Hin recombinational enhancer-binding protein | |||
| 4399 | M | M.Fnu048ORFDP (100% identity) | ATGCAT | M.EcoC1639ORF4399P |
| 4400 | Uncharacterised protein | |||
| 4511 | Ribulose-phosphate 3-epimerase | |||
| 4512 | M | M.Fnu048ORFTP (100% identity) | GATC | M.EcoC1639DamP |
| 4513 | cell division protein DamX | |||
| chromosome 1 | ||||
| 345 | cell division protein DamX | |||
| 346 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoTO60DamP |
| 347 | Ribulose-phosphate 3-epimerase | |||
| 467 | Uncharacterised protein | |||
| 468 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoTO60ORF468P |
| 469 | Hin recombinational enhancer-binding protein | |||
| 1911 | hydrolase | |||
| 1912 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoTO60DcmP |
| 1913 | V | V.SflC32DcmP (74% identity) | V.EcoTO60DcmP | |
| 1914 | inner membrane transporter YedA | |||
| 2612 | pseudogene | |||
| 2615 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoTO60ORF2615P |
| 2616 | Uncharacterised protein | |||
| 3067 | HTH-type transcriptional regulator ImmR | |||
| 3068 | M | M.KpnYN1ORFGP (89% identity) | M.EcoTO60ORF3068P | |
| 3069 | Uncharacterised protein | |||
| ??? | 708 aa hypothetical protein CR517_25310 | |||
| 4237 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoTO60ORF4238P |
| 4238 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoTO60ORF4238P |
| ??? | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M2.EcoTO60ORF4238P |
| 4240 | Uncharacterised protein | |||
| chromosome 1 | ||||
| 401 | cell division protein DamX | |||
| 402 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoTO75DamP |
| 403 | Ribulose-phosphate 3-epimerase | |||
| 529 | Uncharacterised protein | |||
| 530 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoTO75ORF530P |
| 531 | Hin recombinational enhancer-binding protein | |||
| 1916 | hydrolase | |||
| 1917 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.EcoTO75DcmP |
| 1918 | V | V.SflFF64DcmP (100% identity) | V.EcoTO75DcmP | |
| 1919 | inner membrane transporter YedA | |||
| 4283 | LexA repressor | |||
| 4284 | M | M.Sso90ORF15820P (100% identity) | GATC | M.EcoTO75ORF4284P |
| 4285 | PerC transcriptional activator | |||
| chromosome 1 | ||||
| 342 | cell division protein DamX | |||
| 343 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoTO143DamP |
| 344 | Ribulose-phosphate 3-epimerase | |||
| 466 | Uncharacterised protein | |||
| 467 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoTO143ORF467P |
| 468 | Hin recombinational enhancer-binding protein | |||
| 1905 | hydrolase | |||
| 1906 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoTO143DcmP |
| 1907 | V | V.SflC32DcmP (74% identity) | V.EcoTO143DcmP | |
| 1908 | inner membrane transporter YedA | |||
| 2641 | pseudogene | |||
| 2644 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoTO143ORF2644P |
| 2645 | Uncharacterised protein | |||
| 3099 | HTH-type transcriptional regulator ImmR | |||
| 3100 | M | M.KpnYN1ORFGP (89% identity) | M.EcoTO143ORF3100P | |
| 3101 | Uncharacterised protein | |||
| ??? | 708 aa hypothetical protein CR517_25310 | |||
| 4231 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoTO143ORF4232P |
| 4232 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoTO143ORF4232P |
| ??? | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M2.EcoTO143ORF4232P |
| 4234 | Uncharacterised protein | |||
| plasmid 2 | ||||
| 4787 | Uncharacterised protein | |||
| 4788 | M | M.KpnVA569ORF28145P (100% identity) | M.EcoTO75ORF4788P | |
| 4789 | Uncharacterised protein | |||
| plasmid 2 | ||||
| 5078 | Uncharacterised protein | |||
| 5079 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoTO60ORF5079P |
| 5080 | Uncharacterised protein | |||
| plasmid 2 | ||||
| 4903 | Uncharacterised protein | |||
| 4904 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Eco3426ORF4904P |
| 4905 | Uncharacterised protein | |||
| plasmid 2 | ||||
| 5073 | Uncharacterised protein | |||
| ??? | M | M.KpnXJK1ORF29805P (74% identity) | M.EcoTO124ORF5074P | |
| 5075 | methylase | |||
| 5237 | Uncharacterised protein | |||
| 5238 | M | M.Sfl2142ORF380P (100% identity) | M.EcoTO124ORF5238P | |
| 5239 | Uncharacterised protein | |||
| plasmid 2 | ||||
| 5423 | Uncharacterised protein | |||
| 5424 | M | M.KpnVA569ORF28145P (100% identity) | M.EcoTO217ORF5424P | |
| 5425 | Uncharacterised protein | |||
| plasmid 2 | ||||
| 5161 | Uncharacterised protein | |||
| 5162 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoTO148ORF5162P |
| 5163 | Uncharacterised protein | |||
| plasmid 3 | ||||
| 5132 | Uncharacterised protein | |||
| 5133 | M | M.SspPIBORF23080P (100% identity) | M.Eco3426ORF5133P | |
| 5134 | Uncharacterised protein | |||
| plasmid 3 | ||||
| 5495 | Uncharacterised protein | |||
| 5496 | M | M.EcoS0787ORF27095P (97% identity) | M.EcoTO217ORF5493P | |
| 5497 | Uncharacterised protein | |||
| plasmid 3 | ||||
| 5151 | Uncharacterised protein | |||
| 5152 | M | M.SspPIBORF23080P (100% identity) | M.EcoTO143ORF5152P | |
| 5153 | Uncharacterised protein | |||
| plasmid 3 | ||||
| 5355 | Uncharacterised protein | |||
| 5356 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoTO124ORF5356P |
| 5357 | Uncharacterised protein | |||
| plasmid 3 | ||||
| 4841 | IS1 transposase | |||
| 4842 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.EcoTO75ORF4842P |
| 4843 | R | YpsR1ORFAP (99% identity) | CCWGG | EcoTO75ORF4842P |
| 4844 | Integrase core domain protein | |||
| plasmid 4 | ||||
| 5247 | Uncharacterised protein | |||
| 5248 | M | M.SenST46ORF25580P (100% identity) | M.Eco3426ORF5248P | |
| 5249 | PRTRC system protein D | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 4352 | teichuronic acid biosynthesis | |||
| 4353 | R | EcosS3McrBP (100% identity) | EcoTO124McrBP | |
| ??? | R | EcoU15AMcrCP (100% identity) | EcoTO124McrCP | |
| 4355 | type II restriction endonuclease, | |||
| chromosome 1 | ||||
| 4122 | GTP-binding protein YjiA | |||
| 4123 | R | Ssp28760MrrP (100% identity) | EcoTO6MrrP | |
| 4124 | Type-1 restriction enzyme R protein | |||
| 4128 | endoribonuclease SymE | |||
| 4129 | R | Eco11023McrBP (100% identity) | EcoTO6McrBP | |
| 4130 | R | Ssp28760McrCP (100% identity) | EcoTO6McrCP | |
| chromosome 1 | ||||
| 4467 | teichuronic acid biosynthesis | |||
| 4468 | R | EcosS3McrBP (100% identity) | EcoTO217McrBP | |
| ??? | R | EcoU15AMcrCP (100% identity) | EcoTO217McrCP | |
| 4470 | type II restriction endonuclease, | |||
| chromosome 1 | ||||
| 1077 | DNA-invertase hin | |||
| 1078 | R | EcosEC29GmrSDP (100% identity) | Eco3426GmrSDP | |
| 1079 | DNA polymerase V subunit UmuC | |||
| chromosome 1 | ||||
| 4340 | teichuronic acid biosynthesis | |||
| 4341 | R | EcosS3McrBP (100% identity) | EcoTO148McrBP | |
| ??? | R | EcoU15AMcrCP (100% identity) | EcoTO148McrCP | |
| 4343 | type II restriction endonuclease, | |||
| chromosome 1 | ||||
| 4234 | teichuronic acid biosynthesis | |||
| 4235 | R | EcosS3McrBP (100% identity) | EcoTO60McrBP | |
| ??? | R | EcoU15AMcrCP (100% identity) | EcoTO60McrCP | |
| 4237 | type II restriction endonuclease, | |||
| chromosome 1 | ||||
| 2729 | Isocitrate dehydrogenase [NADP] | |||
| 2730 | R | EcosEC27McrCP (100% identity) | EcoTO75McrCP | |
| 2731 | R | EcoteDMcrBP (100% identity) | EcoTO75McrBP | |
| 2732 | IS1 transposase | |||
| chromosome 1 | ||||
| 4228 | Transposase | |||
| 4229 | R | EcosS3McrBP (100% identity) | EcoTO143McrBP | |
| ??? | R | EcoU15AMcrCP (100% identity) | EcoTO143McrCP | |
| 4231 | type II restriction endonuclease, | |||
| chromosome 1 | ||||
| 4046 | teichuronic acid biosynthesis | |||
| 4047 | R | EcosS3McrBP (100% identity) | EcoTO73McrBP | |
| ??? | R | EcoU15AMcrCP (100% identity) | EcoTO73McrCP | |
| 4049 | type II restriction endonuclease, | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1924 | DksA-like zinc finger domain containing protein | |||
| 1925 | M | M.EcoTCMB2ORF10935P (100% identity) | GATC | M.Eco7215ORF1925P |
| 1926 | Bacteriophage replication gene A protein (GPA) | |||