Escherichia coli 11247 |
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Putative Escherichia coli 11247 RM systems
Ref: Asakura,H. et al. unpublished
REBASE ref # 23720
Contig set: 5,332,302 bp
GenBank #: BDLK00000000 (NZ_BDLK00000000)
REBASE acronym: Eco11247
Org_num: 23059
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 801 | Endoribonuclease SymE | |||
| 804 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco11247ORFAP |
| 806 | M | M.EcoPT54II (100% identity) | CACNNNNNNNCTGG | M.Eco11247ORFAP |
| 808 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco11247ORFAP |
| 811 | 82 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2 | 116 aa hypothetical protein | |||
| 3 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco11247ORFFP | |
| 6 | Uncharacterized protein | |||
| 8 | M | M.EcosPA8ORF27775P (100% identity) | M.Eco11247ORFHP | |
| 11 | Uncharacterized protein | |||
| 34 | recombination protein | |||
| 37 | M | M.EcoC3108ORFMP (100% identity) | M.Eco11247ORFIP | |
| 42 | 64 aa hypothetical protein | |||
| 31 | HD domain protein | |||
| 32 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco11247DcmP |
| 34 | V | V.EcoPT54DcmP (100% identity) | V.Eco11247DcmP | |
| 38 | Carboxylate/Amino Acid/Amine Transporter | |||
| 113 | 90 aa hypothetical protein | |||
| 116 | M | M.EcoZ1836ORF22690P (100% identity) | GATC | M.Eco11247ORFGP |
| 120 | LexA DNA binding domain protein | |||
| 89 | 98 aa hypothetical protein | |||
| 90 | M | M.EcosPA8ORF11510P (100% identity) | ATGCAT | M.Eco11247ORFJP |
| 91 | Uncharacterized protein | |||
| 105 | Ribulose-phosphate 3-epimerase | |||
| 106 | M | Site-specific DNA-methyltransferase | GATC | M.Eco11247DamP |
| 109 | Cell division protein DamX | |||
| 141 | 90 aa hypothetical protein | |||
| ??? | M | M.Ecos1613ORF25555P (100% identity) | M.Eco11247ORFEP | |
| 148 | Eae protein | |||
| 614 | Phage integrase | |||
| 615 | C | C.EcoZ1836ORF24740P (100% identity) | CTAAGNNNNNCTTAG | C.Eco11247ORFCP |
| 616 | Restriction endonuclease | |||
| 615 | Transcriptional regulator, XRE family | |||
| 616 | R | EcoS3ORF17765P (100% identity) | RGGNCCY | Eco11247ORFDP |
| 617 | M | M.EcoZ1836ORF24740P (96% identity) | RGGNCCY | M.Eco11247ORFDP |
| 619 | 90 aa hypothetical protein | |||
| 673 | ATP-dependent helicase | |||
| 675 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco11247ORFBP |
| 684 | 138 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 798 | Uncharacterized protein | |||
| 799 | R | EcoX21GmrDP (100% identity) | Eco11247GmrDP | |
| 800 | 81 aa hypothetical protein | |||