Escherichia coli 11229 |
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Putative Escherichia coli 11229 RM systems
Ref: Asakura,H. et al. unpublished
REBASE ref # 23720
Contig set: 5,347,054 bp
GenBank #: BDLJ00000000 (NZ_BDLJ00000000)
REBASE acronym: Eco11229
Org_num: 23058
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4 | GTP-binding protein | |||
| 6 | M | M.EcoPnCatORFFP (97% identity) | M.Eco11229ORFHP | |
| 10 | S | S.Eco981ORF23430P (46% identity) | S1.Eco11229ORFHP | |
| 15 | S | S.Eco3317ORF24390P (45% identity) | S2.Eco11229ORFHP | |
| 18 | R | Eco1317ORF6510P (98% identity) | Eco11229ORFHP | |
| 21 | Uncharacterized protein | |||
| 19 | Uncharacterized protein | |||
| 20 | M | M.SflN101ORF11895P (100% identity) | M.Eco11229ORFFP | |
| 21 | S | S.SflN101ORF11895P (100% identity) | S.Eco11229ORFFP | |
| 22 | Uncharacterized protein | |||
| 80 | Uncharacterized protein | |||
| 82 | R | SflN101ORF11675P (100% identity) | Eco11229ORFCP | |
| 85 | M | M.SflTORF4636P (100% identity) | M.Eco11229ORFCP | |
| 87 | S | S.SflN101ORF11675P (100% identity) | S.Eco11229ORFCP | |
| 90 | Endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1 | M | M.Ecos154ORF3040P (100% identity) | M.Eco11229ORFGP | |
| 4 | 75 aa hypothetical protein | |||
| 67 | Carboxylate/Amino Acid/Amine Transporter | |||
| 68 | V | V.Ecos2020DcmP (100% identity) | V.Eco11229DcmP | |
| 72 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco11229DcmP |
| 74 | Hydrolase | |||
| 101 | 175 aa hypothetical protein | |||
| 104 | M | M.Eco1317ORF6705P (97% identity) | M.Eco11229ORFDP | |
| 106 | Holin | |||
| 170 | Regulator | |||
| 173 | M | M.EspP079ORF2847P (100% identity) | GATC | M.Eco11229ORFBP |
| 178 | 116 aa hypothetical protein | |||
| 839 | 98 aa hypothetical protein | |||
| 841 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco11229ORFAP |
| 842 | Uncharacterized protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 15 | Uncharacterized protein | |||
| 17 | R | SflN101McrBP (100% identity) | Eco11229McrBP | |
| 18 | R | SflN101McrCP (100% identity) | Eco11229McrCP | |
| 19 | Uncharacterized protein | |||
| 93 | 71 aa hypothetical protein | |||
| 94 | R | EcoW122GmrDP (100% identity) | Eco11229GmrDP | |
| 96 | Uncharacterized protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 115 | Ribulose-phosphate 3-epimerase | |||
| 116 | M | Site-specific DNA-methyltransferase | GATC | M.Eco11229ORFEP |
| 119 | Cell division protein DamX | |||