Spirosoma linguale DSM 74 |
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Putative Spirosoma linguale DSM 74 RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 14240
| Sequence length: | GenBank #: | |
| Chromosome: | 8,078,757 bp | CP001769 (NC_013730) |
| plasmid pSLIN01: | 189,452 bp | CP001770 (NC_013731) |
REBASE acronym: Sli74
Org_num: 5738
All begin Slin_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3085 | 55 aa hypothetical protein | |||
| 3086 | R | Ssp42546ORF3750P (77% identity) | Sli74ORF3088P | |
| 3087 | 329 aa conserved hypothetical protein | |||
| 3088 | M | M.Fma9516ORF7390P (67% identity) | M.Sli74ORF3088P | |
| 3089 | S | S.SfaWB8ORF10085P (28% identity) | S.Sli74ORF3088P | |
| 3090 | HNH endonuclease | |||
| 4287 | 148 aa hypothetical protein | |||
| 4288 | M | 81 aa hypothetical protein | M.Sli74ORF4288P | |
| 6257 | 159 aa hypothetical protein | |||
| 6258 | M | M.Fba311ORF24900P (77% identity) | M.Sli74ORF6258P | |
| 6259 | protein of unknown function DUF1016 | |||
| 6260 | S | S.Eic194ORF9340P (38% identity) | S.Sli74ORF6258P | |
| 6261 | 112 aa hypothetical protein | |||
| 6262 | 124 aa hypothetical protein | |||
| 6263 | 232 aa hypothetical protein | |||
| 6264 | R | ObalpD02ORF6120P (64% identity) | Sli74ORF6258P | |
| 6265 | 71 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1961 | 266 aa conserved hypothetical protein | |||
| 1962 | RM | EspLN353ORF1875P (70% identity) | Sli74ORF1962P | |
| 1963 | Pseudomurein-binding repeat protein | |||
| 3410 | Resolvase domain protein | |||
| 3411 | RM | SspSC414ORF32880P (13% identity) | Sli74ORF3411P | |
| 3412 | Eco57I restriction endonuclease | |||
| 3411 | type II restriction-modification enzyme | |||
| 3412 | RM | MspSJORF27410P (10% identity) | Sli74ORF3412P | |
| 3413 | protein of unknown function DUF1016 | |||
| 4170 | peptidase M16 domain protein | |||
| 4171 | R | Rsl19594ORF3022P (57% identity) | Sli74ORF4172P | |
| 4172 | M | M.SspTS118ORF23660P (37% identity) | CCWGG | M.Sli74ORF4172P |
| 4173 | amino acid permease-associated region | |||
| 4846 | 230 aa conserved hypothetical protein | |||
| 4847 | RM | PbaG22ORF4636P (33% identity) | Sli74ORF4847P | |
| 4848 | PglZ domain protein | |||
| 5043 | peptide-binding protein | |||
| 5044 | R | Fco49512ORF7580P (50% identity) | Sli74ORF5044P | |
| 5045 | Ribonucleoside-diphosphate reductase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pSLIN01 | ||||
| 6678 | 472 aa hypothetical protein | |||
| 6679 | R | Far24704ORF15670P (56% identity) | Sli74ORF6680P | |
| 6680 | M | M.Vfl0221ORFCP (56% identity) | M.Sli74ORF6680P | |
| 6681 | 196 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2470 | gluconate transporter | |||
| 2471 | R | SraDG5AMcrCP (66% identity) | Sli74McrCP | |
| 2472 | ASPIC/UnbV domain protein | |||
| 3092 | Integrase catalytic region | |||
| 3093 | R | Aba31McrBP (19% identity) | Sli74McrB2P | |
| 3094 | 404 aa hypothetical protein | |||