Loktanella vestfoldensis SMR4r |
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Putative Loktanella vestfoldensis SMR4r RM systems
Ref: Topel,M. et al. unpublished
REBASE ref # 24278
| Sequence length: | GenBank #: | |
| Chromosome: | 3,836,950 bp | CP021431 |
| plasmid pSMR4r-2: | 39,380 bp | CP021433 |
REBASE acronym: LveSMR4r
Org_num: 24472
All begin LOKVESSMR4R_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3154 | ATP-dependent RecD-like DNA helicase | |||
| 3155 | R | CspNS6IVP (90% identity) | CGAYNNNNNNGCTG | LveSMR4rIP |
| 3156 | 308 aa hypothetical protein | |||
| 3157 | Abi-like protein | |||
| 3158 | S | S.Rmu17069ORF4191P (59% identity) | CGAYNNNNNNGCTG | S.LveSMR4rI |
| 3159 | M | M.NrhOXR85ORF20625P (93% identity) | CGAYNNNNNNGCTG | M.LveSMR4rI |
| 3160 | WYL domain protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 130 | 71 aa hypothetical protein | |||
| 131 | RM | Rmu17069ORF3902P (84% identity) | LveSMR4rORF131P | |
| 133 | 249 aa hypothetical protein | |||
| 873 | transposase | |||
| 874 | R | XmaDY64ORF8615P (93% identity) | LveSMR4rORF875P | |
| 875 | M | M.Lsa7899ORF14955P (62% identity) | M.LveSMR4rORF875P | |
| 877 | zinc-binding protein | |||
| 2008 | transposase | |||
| 2009 | RM | Rmu3ORF380P (84% identity) | LveSMR4rORF2009P | |
| 2011 | molybdenum transport system permease protein | |||
| 2276 | 110 aa hypothetical protein | |||
| 2277 | R | SspLB126ORF24555P (63% identity) | LveSMR4rORF2277P | |
| 2278 | YaaC-like Protein | |||
| 2548 | 43 aa hypothetical protein | |||
| 2549 | M | M.LveSMR4rORF3119P (95% identity) | M.LveSMR4rORF2549P | |
| 2550 | aminomethyltransferase | |||
| 2594 | DEAD/DEAH box helicase | |||
| 2595 | RM | Rca37b4ORF18070P (76% identity) | CTCGCC | LveSMR4rIV |
| 2596 | WYL domain protein | |||
| 3118 | 43 aa hypothetical protein | |||
| 3119 | M | M.LveSMR4rORF2549P (95% identity) | M.LveSMR4rORF3119P | |
| 3120 | aminomethyltransferase | |||
| 3199 | EamA-like transporter family protein | |||
| 3200 | M | M.LveSMR4rORF2549P (90% identity) | M.LveSMR4rORF3200P | |
| 3201 | 69 aa hypothetical protein | |||
| 3382 | 94 aa hypothetical protein | |||
| 3383 | RM | RbaM385ORF12785P (77% identity) | LveSMR4rORF3383P | |
| 3384 | 88 aa hypothetical protein | |||
| 3723 | 136 aa hypothetical protein | |||
| 3724 | M | M.TspSH1ORF6415P (72% identity) | M.LveSMR4rORF3724P | |
| 3725 | 42 aa hypothetical protein | |||
| 3745 | ribonuclease HII | |||
| 3746 | M | M.Yma211ORFBP (90% identity) | GANTC | M.LveSMR4rII |
| 3747 | 57 aa hypothetical protein | |||
| plasmid pSMR4r-2 | ||||
| 3907 | tRNA(fMet)-specific endonuclease VapC | |||
| 3908 | R | Rmu3ORF4242P (100% identity) | RGATCY | LveSMR4rIIIP |
| 3909 | M | M.Rmu3ORF4242P (100% identity) | RGATCY | M.LveSMR4rIII |
| 3910 | sporulation initiation inhibitor protein Soj | |||