Escherichia coli KOEGE 7 (16a) |
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Putative Escherichia coli KOEGE 7 (16a) RM systems
Ref: Feldgarden,M. et al. unpublished
REBASE ref # 19159
Contig set: 5,049,673 bp
GenBank #: AWAA00000000 (NZ_AWAA00000000)
REBASE acronym: Eco16
Org_num: 23042
All begin G879_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3799 | 165 aa hypothetical protein | |||
| 3800 | M | M.SenS0935ORF770P (99% identity) | ACYNNNNNNGTTC | M.Eco16ORF3800P |
| 3801 | S | S.Ecos53ORF20340P (100% identity) | ACYNNNNNNGTTC | S.Eco16ORF3800P |
| 3802 | R | EcoBA3ORF515P (100% identity) | ACYNNNNNNGTTC | Eco16ORF3800P |
| 3803 | 184 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2932 | 174 aa hypothetical protein | |||
| 2933 | R | SenS530DptFP (100% identity) | Eco16DptFP | |
| 2934 | DNA phosphorothioation-dependent restriction | |||
| 2933 | DNA phosphorothioation-dependent restriction | |||
| 2934 | R | SenI222DptGP (100% identity) | Eco16DptGP | |
| 2935 | DNA phosphorothioation-dependent restriction | |||
| 2934 | DNA phosphorothioation-dependent restriction | |||
| 2935 | R | SenS530DptHP (100% identity) | Eco16DptHP | |
| 2936 | 396 aa hypothetical protein | |||
| 2937 | 512 aa hypothetical protein | |||
| 2938 | M | M.SenS530DndEP (100% identity) | M.Eco16DndEP | |
| 2939 | DNA sulfur modification protein DndD | |||
| 2938 | DNA sulfur modification protein DndE | |||
| 2939 | M | M.SenS530DndDP (100% identity) | M.Eco16DndDP | |
| 2940 | 544 aa hypothetical protein | |||
| 2939 | DNA sulfur modification protein DndD | |||
| 2940 | M | M.SenS530DndCP (100% identity) | M.Eco16DndCP | |
| 2941 | DNA sulfur modification protein DndB | |||
| 2940 | 544 aa hypothetical protein | |||
| 2941 | M | M.SenS530DndBP (100% identity) | M.Eco16DndBP | |
| 2942 | 104 aa hypothetical protein | |||
| 2238 | 138 aa hypothetical protein | |||
| 2239 | M | M.EcoPK8275ORF4990P (100% identity) | M.Eco16ORF2239P | |
| 2240 | 71 aa hypothetical protein | |||
| 4795 | 308 aa hypothetical protein | |||
| 4796 | M | M.SenBR027ORFEP (100% identity) | SAY | M.Eco16ORF4796P |
| 4797 | 73 aa hypothetical protein | |||
| 258 | 71 aa hypothetical protein | |||
| 259 | M | M.Sbo812ORFAP (100% identity) | M.Eco16ORF259P | |
| 260 | 88 aa hypothetical protein | |||
| 3344 | DNA-binding protein fis | |||
| 3345 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco16ORF3345P |
| 3346 | membrane protein | |||
| 3467 | ribulose-phosphate 3-epimerase | |||
| 3468 | M | DNA adenine methylase | GATC | M.Eco16DamP |
| 3469 | protein damX | |||
| 1163 | 569 aa hypothetical protein | |||
| 1164 | M | M.EcoL65ORF1595P (100% identity) | M.Eco16ORF1164P | |
| 1165 | prophage lambda integrase | |||
| 1943 | blue pigment (indigoidine) exporter | |||
| 1944 | V | V.SsoSE61DcmP (100% identity) | V.Eco16DcmP | |
| 1945 | M | M.SsoSE61DcmP (100% identity) | CCWGG | M.Eco16DcmP |
| 1946 | phosphohydrolase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1177 | DNA-invertase lambdoid prophage e14 | |||
| 1178 | R | EcoRS76GmrSDP (99% identity) | Eco16GmrSDP | |
| 1179 | isocitrate dehydrogenase [NADP] | |||