Escherichia coli N11-1317 |
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Putative Escherichia coli N11-1317 RM systems
Ref: Tasara,T. et al. unpublished
REBASE ref # 23517
Contig set: 5,632,250 bp
GenBank #: MPGQ00000000 (NZ_MPGQ00000000)
REBASE acronym: Eco1317
Org_num: 23016
All begin BMT49_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 955 | 112 aa hypothetical protein | |||
| 960 | R | EcoS792ORF20830P (100% identity) | Eco1317ORF970P | |
| 965 | S | S.EcoS792ORF20830P (100% identity) | S.Eco1317ORF970P | |
| 970 | M | M.EcoS792ORF20830P (100% identity) | M.Eco1317ORF970P | |
| 975 | restriction endonuclease | |||
| 6495 | lactate utilization protein C | |||
| 6500 | R | Eco11229ORFHP (98% identity) | Eco1317ORF6510P | |
| 6505 | S | S.Eco3317ORF24390P (68% identity) | S.Eco1317ORF6510P | |
| 6510 | M | M.Eco11229ORFHP (91% identity) | M.Eco1317ORF6510P | |
| 6515 | 50S ribosome-binding GTPase | |||
| 7940 | metal-dependent hydrolase | |||
| 7945 | R | EcoRC1ORF26055P (100% identity) | CCAYNNNNNGTTY | Eco1317ORF7965P |
| 7950 | Appr-1-p processing protein | |||
| 7955 | 218 aa hypothetical protein | |||
| 7960 | S | S.Ecos1613ORF5225P (100% identity) | CCAYNNNNNGTTY | S.Eco1317ORF7965P |
| 7965 | M | M.Ecos1613ORF5225P (100% identity) | CCAYNNNNNGTTY | M.Eco1317ORF7965P |
| 7970 | transcription factor | |||
| 14260 | DNA methylase | |||
| ??? | S | S2.Eco955ORF8695P (100% identity) | S1.Eco1317ORFAP | |
| ??? | S | S2.Eco2448ORFJP (86% identity) | S2.Eco1317ORFAP | |
| 14270 | restriction endonuclease subunit M | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 50 | 112 aa hypothetical protein | |||
| 55 | M | M.Eco955ORF16740P (100% identity) | M.Eco1317ORF55P | |
| 60 | holin | |||
| 27790 | 73 aa hypothetical protein | |||
| ??? | M | M.Eco7607ORFBP (100% identity) | M.Eco1317ORF27795P | |
| 27800 | group II intron reverse transcriptase/maturase | |||
| 720 | 294 aa hypothetical protein | |||
| 725 | R | Eho1074ORF2870P (100% identity) | Eco1317ORF730P | |
| 730 | M | M.Eco4502ORFEP (100% identity) | M.Eco1317ORF730P | |
| 735 | V | V.Eco4502ORFEP (100% identity) | V.Eco1317ORF730P | |
| 740 | 117 aa hypothetical protein | |||
| 24650 | cell division protein DamX | |||
| 24655 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco1317DamP |
| 24660 | ribulose-phosphate 3-epimerase | |||
| 25260 | DUF2556 domain-containing protein | |||
| 25265 | M | M.Sdy12039ORFBP (99% identity) | ATGCAT | M.Eco1317ORF25265P |
| 25270 | Fis family transcriptional regulator | |||
| 6700 | 112 aa hypothetical protein | |||
| 6705 | M | M.Eco955ORF16740P (99% identity) | M.Eco1317ORF6705P | |
| 6710 | holin | |||
| 7390 | TrmB family transcriptional regulator | |||
| 7395 | M | M.EcoF256ORF26310P (98% identity) | M.Eco1317ORF7395P | |
| 7400 | AraC family transcriptional regulator | |||
| 27120 | 74 aa hypothetical protein | |||
| 27125 | R | EmaW492ORF2135P (100% identity) | Eco1317ORF27130P | |
| 27130 | M | M.EmaW492ORF2140P (99% identity) | M.Eco1317ORF27130P | |
| 27135 | transposase | |||
| 12100 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | |||
| 12105 | M | M.EcoAug61ORFAP (91% identity) | M.Eco1317ORF12105P | |
| 12110 | 61 aa hypothetical protein | |||
| 12670 | drug/metabolite exporter YedA | |||
| 12675 | V | V.SflC32DcmP (74% identity) | V.Eco1317DcmP | |
| 12680 | M | M.EcoS792DcmP (100% identity) | CCWGG | M.Eco1317DcmP |
| 12685 | phosphohydrolase | |||
| ??? | Uncharacterized protein | |||
| 14270 | RM | Eco3121ORFGP (75% identity) | Eco1317ORF14270P | |
| 14275 | antitermination protein | |||
| 15145 | lysis protein | |||
| 15150 | M | M.EcoBU10ORF1800P (99% identity) | M.Eco1317ORF15150P | |
| 15155 | 43 aa hypothetical protein | |||
| 15345 | regulator | |||
| 15350 | M | M.EcoSTEC1080ORF7640P (99% identity) | GATC | M.Eco1317ORF15350P |
| 15355 | 70 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19080 | 232 aa hypothetical protein | |||
| 19085 | R | Sen9948IIIP (94% identity) | Eco1317ORF19090P | |
| 19090 | M | M.Eco19035ORF22845P (96% identity) | M.Eco1317ORF19090P | |
| 19095 | 155 aa hypothetical protein | |||