Histophilus somni USDA-ARS-USMARC-63250 |
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Putative Histophilus somni USDA-ARS-USMARC-63250 RM systems
Ref: Harhay,G.P. et al. unpublished
REBASE ref # 21226
Complete sequence: 2,110,642 bp
GenBank #: CP018802
REBASE acronym: Hso63250
Org_num: 22984
All begin BTV18_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3610 | 160 aa hypothetical protein | |||
| 3615 | M | M.HsoATR07ORF6020P (100% identity) | GATTNNNNNGTT | M.Hso63250I |
| 3620 | cell filamentation protein Fic | |||
| 3625 | S | S.HsoATR07ORF6020P (100% identity) | GATTNNNNNGTT | S.Hso63250I |
| 3630 | 326 aa hypothetical protein | |||
| 3635 | R | Hso63374IP (100% identity) | GATTNNNNNGTT | Hso63250IP |
| 3640 | restriction endonuclease subunit M | |||
| 4940 | exodeoxyribonuclease I | |||
| 4945 | R | HsoMASF01ORF5515P (100% identity) | CYYANNNNNNNTRRG | Hso63250IIIP |
| 4950 | 174 aa hypothetical protein | |||
| ??? | S | S.HsoMASF01ORF5515P (43% identity) | CYYANNNNNNNTRRG | S1.Hso63250III |
| ??? | S | S2.Hso63370ORF5385P (96% identity) | CYYANNNNNNNTRRG | S2.Hso63250III |
| 4960 | addiction module protein | |||
| 4965 | M | M.HsoF09ORF5440P (100% identity) | CYYANNNNNNNTRRG | M.Hso63250III |
| 4970 | 284 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1880 | 264 aa hypothetical protein | |||
| 1885 | M | M.HsoMASF01ORF1910P (100% identity) | M.Hso63250ORF1885P | |
| 1890 | 242 aa hypothetical protein | |||
| 2015 | replication protein P | |||
| 2020 | M | M.HsoF09ORF2030P (100% identity) | M.Hso63250ORF2020P | |
| 2025 | 208 aa hypothetical protein | |||
| 6155 | 3-dehydroquinate synthase | |||
| 6160 | M | M.HsoF09ORF6645P (100% identity) | GATC | M.Hso63250ORF6160P |
| 6165 | UTP--glucose-1-phosphate uridylyltransferase | |||
| 7080 | valine--tRNA ligase | |||
| 7085 | M | M.HsoF09ORF7580P (100% identity) | GAWTC | M.Hso63250V |
| 7090 | restriction endonuclease | |||
| 7425 | 302 aa hypothetical protein | |||
| 7430 | V | V.HsoMASF01ORF8025P (100% identity) | V.Hso63250ORF7440P | |
| 7435 | R | HsoKLM014ORF8080P (100% identity) | CCGG | Hso63250ORF7440P |
| 7440 | M | M.HsoKLM014ORF8080P (100% identity) | CCGG | M.Hso63250ORF7440P |
| 7445 | C | C.HsoMASF01ORF8025P (100% identity) | C.Hso63250ORF7440P | |
| 7450 | site-specific integrase | |||
| 7885 | ionic transporter y4hA | |||
| ??? | RM | HsoII (14% identity) | AACNNNNNGTT | Hso63250IVB |
| ??? | RM | HsoMASF01ORF8480AP (99% identity) | AACNNNNNGTT | Hso63250IVA |
| 7895 | HrgA protein | |||
| 8740 | transcriptional regulator | |||
| 8745 | RM | HsoF09ORF9270P (100% identity) | CGANNNNNRTAY | Hso63250II |
| 8750 | S | S.HsoF09ORF9270P (100% identity) | CGANNNNNRTAY | S.Hso63250II |
| 8755 | D-glycero-beta-D-manno-heptose-1,7-bisphosphate | |||