Porphyromonas gingivalis W83 |
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Putative Porphyromonas gingivalis W83 RM systems
Ref: Nelson,K. et al. J. Bacteriol. 185 (18), 5591-5601 (2003)
REBASE ref # 8260
Complete sequence: 2,343,476 bp
GenBank #: AE015924 (NC_002950)
REBASE acronym: PgiT
Org_num: 3796
All begin PG_, PG_t
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 542 | 101 aa hypothetical protein | |||
| 543 | C | C.Pin2866ORF2135P (100% identity) | C.PgiTORF544P | |
| 544 | M | M.Pin2866ORF2135P (91% identity) | M.PgiTORF544P | |
| 545 | S | S.PgiSJD2ORF1690P (100% identity) | S.PgiTORF544P | |
| 546 | conserved domain protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 861 | helicase, SNF2/RAD54 family | |||
| 862 | RM | PgiW83ORF862P (100% identity) | PgiTORF862AP | |
| ??? | RM | PgiW83ORFAP (100% identity) | PgiTORF862BP | |
| 864 | site-specific recombinase, resolvase family | |||
| 1467 | methlytransferase, UbiE/COQ5 family | |||
| 1469 | RM | PgiW83ORF1469P (100% identity) | PgiTORF1469P | |
| 1470 | 76 aa hypothetical protein | |||
| 1695 | 63 aa hypothetical protein | |||
| 1696 | RM | Pgi7436ORF2970AP (100% identity) | PgiTORF1696AP | |
| 1697 | RM | PgiW83ORF1696BP (100% identity) | PgiTORF1696BP | |
| 1701 | glutamine amidotransferase, class | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 965 | phosphatidylserine decarboxylase-related | |||
| 968 | R | PgiW83MrrP (100% identity) | PgiTMrrP | |
| 22 | pseudogene | |||
| 970 | ISPg4, transposase | |||
| 971 | R | PgiW83McrBP (100% identity) | PgiTMcrBP | |
| 972 | R | PgiW83McrCP (100% identity) | PgiTMcrCP | |
| 973 | alpha-1,2-mannosidase family protein | |||