Propionibacterium freudenreichii CIRM-BIA 135 |
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Putative Propionibacterium freudenreichii CIRM-BIA 135 RM systems
Ref: Falentin,Helene unpublished
REBASE ref # 23849
Contig set: 2,617,398 bp
GenBank #: CCYZ00000000 (NZ_CCYZ00000000)
REBASE acronym: Pfr135
Org_num: 22975
All begin PFCIRM135_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3550 | divalent anion:Na+ symporter 2.A.47.3.x | |||
| 3565 | R | PfrCB129ORF243P (100% identity) | ACCNNNNNCTTC | Pfr135ORF3575P |
| 3570 | S | S.PfrP19ORFDP (100% identity) | ACCNNNNNCTTC | S.Pfr135ORF3575P |
| 3575 | M | Protein of unknown function | ACCNNNNNCTTC | M.Pfr135ORF3575P |
| 2810 | M | M.Pfr122ORF4225P (89% identity) | M.Pfr135ORF2810P | |
| 2815 | uncharacterized protein | |||
| 6775 | ABC 2 protein of drug ABC transporter | |||
| 6780 | M | M.Pfr512ORF10470P (99% identity) | M.Pfr135ORF6780P | |
| 6785 | S | Protein of unknown function | S.Pfr135ORF6780P | |
| 6790 | R | PfrJS12aIP (99% identity) | Pfr135ORF6780P | |
| 6795 | DNA polymerase | |||
| 4510 | TIR protein | |||
| 4515 | R | PfrPBF02KORFCP (99% identity) | AGTNNNNNNCTT | Pfr135ORF4535P |
| 4520 | Addiction module antidote protein, HigA family | |||
| 4525 | Plasmid maintenance system killer family | |||
| ??? | S | S.PfrPBF01ORFEP (100% identity) | AGTNNNNNNCTT | S.Pfr135ORF4535P |
| 4535 | M | M.PfrJSII (100% identity) | AGTNNNNNNCTT | M.Pfr135ORF4535P |
| 4540 | TetR family transcriptional regulator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12030 | Carbohydrate kinase, PfkB | |||
| 12035 | M | M.PfrPBF13ORFBP (100% identity) | CCWGG | M.Pfr135ORF12035P |
| 12040 | 703 aa Hypothetical protein | |||
| 3520 | uncharacterized protein | |||
| 3525 | RM | PfrJS17aORF2325P (96% identity) | Pfr135ORF3525P | |
| 3530 | uncharacterized protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3505 | transcriptional regulator | |||
| 3510 | M | M.PfrJS17aORF2328P (100% identity) | M.Pfr135ORF3510P | |
| 3515 | R | PfrJS17aORF2328P (100% identity) | Pfr135ORF3510P | |
| 3520 | uncharacterized protein | |||
| 790 | Predicted protein | |||
| 795 | M | M.Bsp051ORF23800P (98% identity) | M.Pfr135ORF795P | |
| 800 | R | Bsp051ORF23800P (98% identity) | Pfr135ORF795P | |
| 805 | ATP-dependent exoDNAse (Exonuclease V) alpha | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3100 | 97 aa Hypothetical protein | |||
| 3105 | R | PfrTL19ORFBP (99% identity) | Pfr135ORF3105P | |
| 3110 | Anaerobic C4-dicarboxylate transporter | |||