Propionibacterium freudenreichii CIRM-BIA 134 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Propionibacterium freudenreichii CIRM-BIA 134 RM systems
Ref: Falentin,Helene unpublished
REBASE ref # 23849
Contig set: 2,629,857 bp
GenBank #: CCYY00000000 (NZ_CCYY00000000)
REBASE acronym: Pfr134
Org_num: 22974
All begin PFCIRM134_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 8865 | DNA polymerase | |||
| 8870 | R | PfrP1ORF11000P (99% identity) | CAGNNNNNNCTG | Pfr134ORF8885P |
| 8875 | S | S.PfrPBF13ORFFP (24% identity) | S1.Pfr134ORF8885P | |
| ??? | S | S1.PfrJS14III (100% identity) | CAGNNNNNNCTG | S2.Pfr134ORF8885P |
| 8885 | M | M.PfrP1ORF11000P (100% identity) | CAGNNNNNNCTG | M.Pfr134ORF8885P |
| 8900 | IM protein of drug ABC transporter (DRI:YHIH) | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10295 | Transposase, IS4 family | |||
| 10300 | M | M.Msp714ORF2500P (72% identity) | M.Pfr134ORF10300P | |
| 10305 | 5-methylcytosine-specific restriction enzyme | |||
| 6815 | uncharacterized protein | |||
| 6820 | V | V.PfrP18ORF10145P (100% identity) | V.Pfr134ORF6830P | |
| 6825 | R | PfrP18ORF10145P (100% identity) | Pfr134ORF6830P | |
| 6830 | M | M.PfrP18ORF10145P (100% identity) | M.Pfr134ORF6830P | |
| 6840 | 67 aa Hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6855 | Type I restriction-modification system DNA | |||
| 6860 | M | M.PfrP23ORF2585P (100% identity) | AGCAGY | M.Pfr134ORF6860P |
| 6865 | R | PfrP23ORF2585P (100% identity) | AGCAGY | Pfr134ORF6860P |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6470 | Transposase | |||
| 6475 | R | PfrTL19ORFBP (90% identity) | Pfr134ORF6475P | |
| 6480 | 99 aa Hypothetical protein | |||
| 6650 | 297 aa Hypothetical protein | |||
| 6655 | R | PfrTL29Mrr3P (99% identity) | Pfr134MrrP | |
| 6660 | Multi antimicrobial extrusion protein MatE | |||