Escherichia coli strain Z247 |
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Putative Escherichia coli strain Z247 RM systems
Ref: Zheng,B. et al. Clin. Infect. Dis. 63 (10), 1393-1395 (2016)
REBASE ref # 24608
| Sequence length: | GenBank #: | |
| Chromosome: | 5,013,813 bp | CP021207 |
| plasmid p2474-3: | 86,725 bp | CP021208 |
| plasmid p2474-MCR1: | 223,982 bp | CP021209 |
| plasmid p2474-NDM1: | 75,553 bp | CP021210 |
REBASE acronym: EcoZ247
Org_num: 24428
All begin CA270_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19775 | 237 aa hypothetical protein | |||
| 19780 | R | EcoW004ORF18990P (100% identity) | EcoZ247ORF19790P | |
| 19785 | S | S.EcoW004ORF18990P (100% identity) | S.EcoZ247ORF19790P | |
| 19790 | M | M.EcoW004ORF18990P (100% identity) | M.EcoZ247ORF19790P | |
| 19795 | 699 aa hypothetical protein | |||
| 22075 | 52 aa hypothetical protein | |||
| 22080 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoZ247ORF22085P |
| 22085 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoZ247ORF22085P |
| 22090 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoZ247ORF22085P |
| 22095 | 267 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5665 | drug/metabolite exporter YedA | |||
| 5670 | V | V.SflC32DcmP (74% identity) | V.EcoZ247DcmP | |
| 5675 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoZ247DcmP |
| 5680 | phosphohydrolase | |||
| 13000 | Fis family transcriptional regulator | |||
| 13005 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoZ247ORF13005P |
| 13010 | transporter | |||
| 13630 | ribulose-phosphate 3-epimerase | |||
| 13635 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoZ247DamP |
| 13640 | cell division protein DamX | |||
| 16665 | 74 aa hypothetical protein | |||
| 16670 | M | M.EcoA13ORF1050P (100% identity) | M.EcoZ247ORF16670P | |
| 16675 | R | EcoPM22ORF25P (99% identity) | EcoZ247ORF16670P | |
| 16680 | phage portal protein | |||
| 20030 | 164 aa hypothetical protein | |||
| 20035 | M | M.EcoM17ORF23690P (100% identity) | GATC | M.EcoZ247ORF20035P |
| 20040 | LexA family transcriptional regulator | |||
| 21840 | 164 aa hypothetical protein | |||
| 21845 | M | M.Sso7924ORF2966P (100% identity) | GATC | M.EcoZ247ORF21845P |
| 21850 | LexA family transcriptional regulator | |||
| 21880 | TrmB family transcriptional regulator | |||
| 21885 | M | M.Sso63633ORF22290P (100% identity) | M.EcoZ247ORF21885P | |
| 21890 | lysis protein S | |||
| 23535 | TrmB family transcriptional regulator | |||
| 23540 | M | M.EcosE1ORFAP (100% identity) | M.EcoZ247ORF23540P | |
| 23545 | 64 aa hypothetical protein | |||
| plasmid p2474-3 | ||||
| 26030 | 103 aa hypothetical protein | |||
| 26035 | M | M.Ssp14523ORF22990P (100% identity) | M.EcoZ247ORF26035P | |
| 26040 | 73 aa hypothetical protein | |||
| plasmid p2474-MCR1 | ||||
| 26350 | 284 aa hypothetical protein | |||
| 26355 | M | M.YpsF1ORFDP (100% identity) | M.EcoZ247ORF26355P | |
| 26360 | DNA-binding protein | |||
| 26470 | 202 aa hypothetical protein | |||
| 26475 | M | M.YpsF1ORFBP (100% identity) | M.EcoZ247ORF26475P | |
| 26480 | 108 aa hypothetical protein | |||
| 27030 | nuclease | |||
| 27035 | M | M.YpsF1ORFCP (100% identity) | M.EcoZ247ORF27035P | |
| 27040 | 439 aa hypothetical protein | |||
| plasmid p2474-NDM1 | ||||
| 27840 | 73 aa hypothetical protein | |||
| 27845 | M | M.Xca80ORFEP (100% identity) | M.EcoZ247ORF27845P | |
| 27850 | 59 aa hypothetical protein | |||