Photobacterium damselae subsp. damselae KC-Na-1 |
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Putative Photobacterium damselae subsp. damselae KC-Na-1 RM systems
Ref: Kim,J.H. and Lee,K. unpublished
REBASE ref # 24606
| Sequence length: | GenBank #: | |
| chromosome I: | 3,134,662 bp | CP021151 |
| chromosome II: | 1,105,401 bp | CP021152 |
REBASE acronym: PdaNa1
Org_num: 24426
All begin CAY62_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 7040 | 411 aa hypothetical protein | |||
| 7045 | S | S.PdaNB1ORF12710P (100% identity) | S.PdaNa1ORF7050P | |
| 7050 | M | M.PdaNB1ORF12710BP (100% identity) | M1.PdaNa1ORF7050P | |
| 7055 | AAA family ATPase | |||
| 7060 | integrase | |||
| 7065 | M | restriction endonuclease subunit M | M2.PdaNa1ORF7050P | |
| 7070 | 280 aa hypothetical protein | |||
| 7095 | 212 aa hypothetical protein | |||
| 7100 | M | M.PdaNB1ORF12615P (100% identity) | AAAGNNNNNCTC | M.PdaNa1II |
| 7105 | S | S.PdaNB1ORF12615P (37% identity) | AAAGNNNNNCTC | S.PdaNa1II |
| 7110 | ATP-binding protein | |||
| 7115 | TIGR02646 family protein | |||
| 7120 | 228 aa hypothetical protein | |||
| 7125 | 180 aa hypothetical protein | |||
| 7130 | 167 aa hypothetical protein | |||
| 7135 | R | PdaNB1ORF12615P (100% identity) | AAAGNNNNNCTC | PdaNa1IIP |
| 7140 | metal-dependent hydrolase | |||
| 7155 | 180 aa hypothetical protein | |||
| 7160 | M | DNA methyltransferase | M.PdaNa1ORF7160P | |
| 7165 | multidrug transporter | |||
| 7170 | R | PdaD11ORF5665P (99% identity) | PdaNa1ORF7160P | |
| 7175 | NrdH-redoxin | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome II | ||||
| 16545 | 98 aa hypothetical protein | |||
| 16550 | M | M.PdaNB1ORF17995P (100% identity) | M.PdaNa1ORF16550P | |
| 16555 | phosphohydrolase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 2275 | histidine-histamine antiporter | |||
| ??? | R | PdaD11ORF10235P (79% identity) | PdaNa1ORF2280P | |
| 2290 | DNA helicase II | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 13120 | 65 aa hypothetical protein | |||
| 13125 | M | M.PdaNB1DamP (100% identity) | GATC | M.PdaNa1I |
| 13130 | 503 aa hypothetical protein | |||