Vibrio campbellii LA16-V1 |
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Putative Vibrio campbellii LA16-V1 RM systems
Ref: Kim,J.H. and Han,J.E. unpublished
REBASE ref # 25646
| Sequence length: | GenBank #: | |
| chromosome I: | 3,579,637 bp | CP021145 |
| chromosome II: | 2,230,177 bp | CP021146 |
| plasmid pLA16-1: | 109,793 bp | CP021147 |
| plasmid pLA16-4: | 63,992 bp | CP021150 |
REBASE acronym: VcaV1
Org_num: 24391
All begin CAY59_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 680 | integrase | |||
| 685 | R | VspSS3ORF2481P (100% identity) | CCANNNNNNTTGY | VcaV1IVP |
| 690 | S | S.VspSS3ORF2481P (60% identity) | CCANNNNNNTTGY | S.VcaV1IV |
| 695 | M | M.VspSS3ORF2481P (97% identity) | CCANNNNNNTTGY | M.VcaV1IV |
| 700 | 153 aa hypothetical protein | |||
| 13970 | 620 aa hypothetical protein | |||
| 13975 | M | M.Sch17377ORF7300P (95% identity) | CNGANNNNNNNTGAY | M.VcaV1I |
| 13980 | S | S.Vat7223ORFGP (52% identity) | CNGANNNNNNNTGAY | S.VcaV1I |
| 13985 | R | Vch253ORF7320P (99% identity) | CNGANNNNNNNTGAY | VcaV1IP |
| 13990 | metal-dependent hydrolase | |||
| 16665 | 182 aa hypothetical protein | |||
| 16670 | S | S.VcaV1ORF16755P (68% identity) | GAAGNNNNGTT | S.VcaV1II |
| 16675 | M | M.VbaORF11336P (94% identity) | GAAGNNNNGTT | M.VcaV1II |
| 16680 | R | VowVC2WORF7990P (95% identity) | GAAGNNNNGTT | VcaV1IIP |
| 16685 | 80 aa hypothetical protein | |||
| chromosome II | ||||
| 16750 | 0 aa hypothetical protein | |||
| 16755 | S | S.VcaV1II (68% identity) | S.VcaV1ORF16755P | |
| 16760 | 182 aa hypothetical protein | |||
| plasmid pLA16-4 | ||||
| 28120 | pyrophosphatase | |||
| 28125 | M | M.VcaC012ORF15680P (98% identity) | GCCANNNNNNNTTA | M.VcaV1III |
| 28130 | S | S.Tse42588ORFEP (50% identity) | GCCANNNNNNNTTA | S.VcaV1III |
| 28135 | 278 aa hypothetical protein | |||
| 28140 | R | Vca4131ORF19065P (98% identity) | GCCANNNNNNNTTA | VcaV1IIIP |
| 28145 | metal-dependent hydrolase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 2450 | cell division protein DamX | |||
| 2455 | M | M.VspG11DamP (100% identity) | GATC | M.VcaV1Dam |
| 2460 | ribulose-phosphate 3-epimerase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pLA16-1 | ||||
| 26990 | 80 aa hypothetical protein | |||
| 26995 | M | M.Vha14596ORFDP (37% identity) | CGAGG | M.VcaV1V |
| 27000 | R | Isp5S32ORF3905P (96% identity) | CGAGG | VcaV1VP |
| 27005 | 251 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 13990 | metal-dependent hydrolase | |||
| 13995 | R | VdiR31McrBP (90% identity) | VcaV1McrBP | |
| 14000 | R | VdiR31McrCP (99% identity) | VcaV1McrCP | |
| 14005 | resolvase | |||