Propionibacterium freudenreichii P.UF1 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Propionibacterium freudenreichii P.UF1 RM systems
Ref: Colliou,N. et al. unpublished
REBASE ref # 23858
Complete sequence: 2,630,908 bp
GenBank #: CP018002
REBASE acronym: PfrUF1
Org_num: 22951
All begin BMR99_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6745 | 101 aa hypothetical protein | |||
| 6750 | R | PfrTL19IP (100% identity) | GAANNNNNNNCTT | PfrUF1IIIP |
| 6755 | S | S.PfrTL29I (100% identity) | GAANNNNNNNCTT | S.PfrUF1III |
| 6760 | restriction endonuclease | |||
| ??? | M | M.PfrPBF10ORFFP (100% identity) | GAANNNNNNNCTT | M.PfrUF1IIIP |
| 6770 | 297 aa hypothetical protein | |||
| 10880 | 606 aa hypothetical protein | |||
| 10885 | M | M.PfrJS23ORF2177P (100% identity) | M.PfrUF1ORF10885P | |
| ??? | S | S1.PfrPBF10ORFGP (100% identity) | S1.PfrUF1ORF10885P | |
| 10895 | S | S1.PfrPBF14ORFCP (100% identity) | S2.PfrUF1ORF10885P | |
| 10900 | R | PfrPBF14ORFCP (100% identity) | PfrUF1ORF10885P | |
| 10905 | DNA polymerase III subunit epsilon | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9865 | 156 aa hypothetical protein | |||
| 9870 | RM | PfrPBF12ORFAP (99% identity) | CTTCNAC | PfrUF1II |
| 9875 | ISL3 family transposase | |||
| 10935 | 126 aa hypothetical protein | |||
| ??? | R | PfrP1ORF6740P (100% identity) | C | PfrUF1ORFAP |
| 10940 | 75 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10025 | 79 aa hypothetical protein | |||
| 10030 | M | M.PfrPBF12ORFEP (100% identity) | AGCAGY | M.PfrUF1I |
| 10035 | R | PfrPBF14ORFGP (100% identity) | AGCAGY | PfrUF1IP |
| 10040 | 211 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6755 | restriction endonuclease subunit S | |||
| 6760 | R | PfrTL29MrrP (100% identity) | PfrUF1MrrP | |
| 6765 | type I restriction-modification system subunit | |||
| 9575 | C4-dicarboxylate ABC transporter | |||
| ??? | R | PfrPBF10ORFBP (100% identity) | PfrUF1ORF9580P | |
| 9585 | 99 aa hypothetical protein | |||
| 9730 | phosphoenolpyruvate synthase regulatory protein | |||
| ??? | R | PfrTL29Mrr3P (96% identity) | PfrUF1Mrr2P | |
| 9740 | MATE family efflux transporter | |||