Phycisphaerae bacterium ST-PulAB-D4 |
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Putative Phycisphaerae bacterium ST-PulAB-D4 RM systems
Ref: Spring,S. et al. unpublished
REBASE ref # 23836
Complete sequence: 3,192,293 bp
GenBank #: CP021023
REBASE acronym: PbaD4
Org_num: 24305
All begin STSP1_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 36 | Acyl-[acyl-carrier-protein]--UDP-N- | |||
| 37 | M | M.Dli5ac10ORF34890P (66% identity) | GGNCC | M.PbaD4V |
| 38 | R | KstMBR1ORF2616P (70% identity) | GGNCC | PbaD4VP |
| 39 | oxidoreductase YcjS | |||
| 743 | Sulfite exporter TauE/SafE | |||
| 744 | M | M.Bsc12643ORF17240P (47% identity) | CCWGG | M.PbaD4II |
| 745 | R | EtrD17ORF355P (63% identity) | CCWGG | PbaD4IIP |
| 746 | Sulfate adenylyltransferase subunit 2 | |||
| 863 | Mannosyl-glycoprotein | |||
| ??? | M | DolHORF905P (23% identity) | M.PbaD4ORF864P | |
| 866 | Virulence protein | |||
| 866 | Virulence protein | |||
| 867 | RM | PpaD9ORF8040P (70% identity) | PbaD4ORF867P | |
| 868 | Cysteine--tRNA ligase | |||
| 998 | Glucose-6-phosphate isomerase | |||
| ??? | R | type II restriction endonuclease subunit R | CGCG | PbaD4IVP |
| 999 | M | M.PbaD3II (91% identity) | CGCG | M.PbaD4IV |
| 1000 | RNA polymerase sigma factor SigV | |||
| 1038 | DNA mismatch repair protein MutS | |||
| 1039 | M | M1.PbaD3IVP (84% identity) | CATG | M1.PbaD4VIP |
| 1040 | M | M2.PbaD3IVP (88% identity) | CATG | M2.PbaD4VIP |
| 1041 | transcriptional regulator | |||
| 1042 | R | PbaD3IVP (86% identity) | CATG | PbaD4VIP |
| 1043 | tRNA modification GTPase MnmE | |||
| 1186 | integral membrane protein | |||
| 1187 | M | M.PbaD3ORF1132P (87% identity) | M.PbaD4ORF1187P | |
| 1188 | translation initiation factor Sui1 | |||
| 1230 | methyltransferase, FkbM family | |||
| 1231 | M | M.PbaD3ORF1101P (77% identity) | M.PbaD4ORF1231P | |
| 1232 | PEP-CTERM protein-sorting domain-containing | |||
| 1683 | ABC transporter ATP-binding protein uup | |||
| 1684 | R | Dbazrk40ORF12435P (69% identity) | CTAG | PbaD4IIIP |
| 1685 | M | M.PbaD3ORF1461P (72% identity) | CTAG | M.PbaD4III |
| 1686 | 7-cyano-7-deazaguanine synthase | |||
| 1860 | 30S ribosomal protein S1 | |||
| 1861 | R | PbaD3IIIP (93% identity) | PbaD4ORF1862P | |
| 1862 | M | M.PbaD3III (88% identity) | GTSAC | M.PbaD4ORF1862P |
| 1863 | Argininosuccinate lyase 1 | |||
| 2037 | 166 aa hypothetical protein | |||
| 2038 | M | M.PbaD3V (80% identity) | TTTAAA | M.PbaD4I |
| 2039 | 135 aa hypothetical protein | |||
| 2387 | Phosphoribosylamine--glycine ligase | |||
| 2388 | M | M.Msp273I (45% identity) | GATC | M1.PbaD4ORF2388P |
| 2389 | R | MhiM3ORF2380P (59% identity) | PbaD4ORF2388P | |
| 2390 | M | M2.UbaMeierORFIP (54% identity) | GATC | M2.PbaD4ORF2388P |
| 2391 | 77 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 870 | pyridoxal phosphate enzyme, YggS family | |||
| 871 | R | PbaD1McrCP (52% identity) | PbaD4McrCP | |
| 872 | R | Ssp3039McrBP (21% identity) | PbaD4McrBP | |
| 873 | Thiol-disulfide oxidoreductase ResA | |||
| 1644 | amino acid permease YhdG | |||
| 1645 | R | Cst2910MrrP (49% identity) | PbaD4MrrP | |
| 1646 | 318 aa hypothetical protein | |||