Veillonella parvula DSM 2008 |
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Putative Veillonella parvula DSM 2008 RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 14167
Complete sequence: 2,132,142 bp
GenBank #: CP001820 (NC_013520)
REBASE acronym: Vpa2008
Org_num: 5642
All begin Vpar_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 115 | 169 aa hypothetical protein | |||
| 116 | M | M.Vpa11810I (100% identity) | GGCANNNNNNTTA | M.Vpa2008I |
| 117 | S | S.Vpa11810I (100% identity) | GGCANNNNNNTTA | S.Vpa2008I |
| 118 | R | Vpa11810IP (100% identity) | GGCANNNNNNTTA | Vpa2008IP |
| 119 | ABC transporter related protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 181 | GMP synthase, large subunit | |||
| 182 | R | Vpa11810ORF191P (100% identity) | CCGG | Vpa2008ORF182P |
| 183 | 380 aa hypothetical protein | |||
| 183 | 380 aa hypothetical protein | |||
| 184 | M | M.Vpa11810ORF191P (100% identity) | CCGG | M.Vpa2008ORF184P |
| 185 | restriction endonuclease | |||
| 184 | DNA-cytosine methyltransferase | |||
| 185 | R | Vpa11810ORF192P (100% identity) | CCWGG | Vpa2008ORF185P |
| 186 | 136 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 447 | transcriptional regulator, XRE family | |||
| 448 | M | M.Vpa11810II (100% identity) | GNAATC | M.Vpa2008II |
| 449 | R | Vpa11810IIP (100% identity) | GNAATC | Vpa2008IIP |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1556 | NUDIX hydrolase | |||
| 1557 | R | Vpa11810ORF1635P (100% identity) | Vpa2008ORF1557P | |
| 1558 | 309 aa hypothetical protein | |||
| 1739 | 276 aa hypothetical protein | |||
| 1740 | R | Vpa11810McrCP (100% identity) | Vpa2008McrCP | |
| 1741 | R | Vpa11810McrBP (100% identity) | Vpa2008McrBP | |
| 1742 | cytoplasmic protein | |||