Clostridioides difficile 630 delta erm |
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Putative Clostridioides difficile 630 delta erm RM systems
Ref: Dannheim,H. et al. J. Med. Microbiol. 66 (3), 286-293 (2017)
REBASE ref # 24304
Complete sequence: 4,293,048 bp
GenBank #: CP016318
REBASE acronym: Cdi28645
Org_num: 23885
All begin CDIF630erm_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1051 | phage protein | |||
| 1052 | M | M.PdiZ31ORF1645P (100% identity) | M.Cdi28645ORF1052P | |
| 1053 | phage protein | |||
| 1060 | phage protein | |||
| 1061 | M | M.Pdi630ORF9350P (100% identity) | TGGCCA | M.Cdi28645ORF1061P |
| 1062 | phage endodeoxyribonuclease | |||
| 1254 | conjugative transposon protein | |||
| 1255 | M | M.Pdi630ORF11090P (100% identity) | CCSSGG | M.Cdi28645ORF1255P |
| 1256 | hydrolase | |||
| 3020 | phospholipase | |||
| 3021 | M | M.PdiZ31ORF1541P (100% identity) | CAAAAA | M.Cdi28645ORF3021P |
| 3022 | transcriptional regulator, Rrf2 family | |||
| 3431 | 33 aa hypothetical protein | |||
| 3432 | M | M.Pdi6602ORF710333P (100% identity) | GCNGC | M.Cdi28645ORF3432P |
| 3433 | 872 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2315 | transcriptional regulator, sigma-54-dependent | |||
| 2316 | R | Pdi630McrCP (100% identity) | Cdi28645McrCP | |
| 2317 | R | Pdi6602McrBP (100% identity) | Cdi28645McrBP | |
| 2318 | cell division GTPase | |||