Salmonella enterica FORC_030 |
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Putative Salmonella enterica FORC_030 RM systems
Ref: Kim,S.I. and Yoon,H. unpublished
REBASE ref # 24145
| Sequence length: | GenBank #: | |
| Chromosome: | 4,943,477 bp | CP015598 |
| plasmid pFORC_030: | 94,046 bp | CP015599 |
REBASE acronym: Sen30
Org_num: 23126
All begin FORC30_, FORC30_p
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4106 | inner membrane protein | |||
| 4107 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen30ORF4108P |
| 4108 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen30ORF4108P |
| 4109 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen30ORF4108P |
| 4110 | 110 aa Hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 365 | Methyl-directed repair DNA adenine methylase | |||
| 366 | M | M.StyTDamP (100% identity) | GATC | M.Sen30DamP |
| 367 | Phosphoglycolate phosphatase | |||
| 460 | Adenine-specific methyltransferase | |||
| 461 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen30ORF461P |
| 462 | tRNA dihydrouridine synthase DusB | |||
| 1210 | Phage-associated DNA methyl transferase | |||
| ??? | M | M.Sty13348ORF110P (100% identity) | M.Sen30ORF1211P | |
| 1213 | Phage antitermination protein Q | |||
| 1874 | Phage-related protein | |||
| 1875 | M | M.StyUK1V (100% identity) | GATC | M.Sen30ORF1875P |
| 1876 | Phage antitermination protein Q | |||
| 1920 | Drug/Metabolite transporter (DMT) superfamily | |||
| 1921 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen30DcmP |
| 1922 | V | V.StyUK1DcmP (100% identity) | V.Sen30DcmP | |
| 1923 | 306 aa Hypothetical protein | |||
| 4138 | Gluconokinase | |||
| 4139 | RM | StyUK1IV (100% identity) | GATCAG | Sen30ORF4139P |
| 4140 | 5-keto-D-gluconate 5-reductase | |||
| plasmid pFORC_030 | ||||
| 74 | 63 aa hypothetical protein | |||
| 75 | M | M.StyUK1ORFAP (100% identity) | M.Sen30ORF75P | |
| 76 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3608 | metabolite transport protein | |||
| 3609 | R | StyUK1IP (99% identity) | CAGAG | Sen30ORF3610P |
| 3610 | M | M.Sen5717II (99% identity) | M.Sen30ORF3610P | |
| 3611 | RND efflux system inner membrane transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4105 | 95 aa Hypothetical protein | |||
| 4106 | R | StyUK1MrrP (100% identity) | Sen30MrrP | |
| 4107 | 1169 aa Hypothetical protein | |||