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Putative Lactococcus cremoris JM2 RM systems
Ref: Kelleher,P. et al. BMC Genomics 18 (1), 267 (2017)
REBASE ref # 24308
Sequence length: | GenBank #: | |
Chromosome: | 2,373,777 bp | CP015900 |
plasmid pJM2C: | 38,979 bp | CP121078 |
plasmid pJM2E: | 18,866 bp | CP121080 |
plasmid pJM2H: | 4,159 bp | CP121081 |
REBASE acronym: LcrJM2
Org_num: 20807
All begin LLJM2_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
plasmid pJM2C | ||||
4600 | 290 aa hypothetical protein | |||
4605 | R | Lra4877ORF4835P (99% identity) | LcrJM2ORF4610P | |
4610 | M | M.LcrJM2ORF5P (98% identity) | M.LcrJM2ORF4610P | |
4615 | IS982-like element ISLll1 family transposase | |||
4620 | S | S.Lla3901ORF16P (39% identity) | S.LcrJM2ORF4610P | |
4625 | 62 aa hypothetical protein | |||
4675 | RepB family plasmid replication initiator | |||
4680 | S | S.Lla223I (70% identity) | S.LcrJM2ORF4680P | |
4685 | 133 aa hypothetical protein | |||
plasmid pJM2E | ||||
4895 | RepB family plasmid replication initiator | |||
4900 | S | S.Lcr029ORF13475P (52% identity) | S1.LcrJM2ORF4900P | |
4905 | S | S.Lra4877ORF11485P (50% identity) | S2.LcrJM2ORF4900P | |
4910 | IS6 family transposase | |||
plasmid pJM2H | ||||
??? | S | S.LlaDRC3III (67% identity) | ACANNNNNNRTAA | S.LcrJM2V |
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
3700 | 516 aa conserved hypothetical protein | |||
2355 | R | LlaSD96ORF2151P (33% identity) | LcrJM2ORF2357BP | |
2356 | R | LlaSD96ORF2151P (66% identity) | LcrJM2ORF2357AP | |
2357 | M | M.LlaSD96ORF2151P (27% identity) | M.LcrJM2ORF2357BP | |
2358 | M | M.LlaSD96ORF2151P (47% identity) | M.LcrJM2ORF2357AP | |
2359 | 408 aa hypothetical protein |