Corynebacterium striatum ATCC 6940 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Corynebacterium striatum ATCC 6940 RM systems
Ref: Qin,X. et al. unpublished
REBASE ref # 11215
Contig set: 2,724,288 bp
GenBank #: ACGE00000000 (NZ_ACGE00000000)
REBASE acronym: Cst6940
Org_num: 22778
All begin HMPREF0308_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1435 | R | Cst9755ORF419P (42% identity) | Cst6940ORF1435P | |
| 1436 | 165 aa hypothetical protein | |||
| 1432 | divergent AAA domain protein | |||
| ??? | R | Cst215ORF8370P (61% identity) | Cst6940ORF1433P | |
| 2533 | toxin-antitoxin system, toxin component, PIN | |||
| 2534 | R | Cst764IP (97% identity) | Cst6940ORF2534P | |
| 2526 | 202 aa hypothetical protein | |||
| 2527 | M | M.Cst764I (100% identity) | GGANNNNNNCTTC | M.Cst6940II |
| 2528 | S | S.Cst764I (100% identity) | GGANNNNNNCTTC | S.Cst6940II |
| 2529 | 76 aa hypothetical protein | |||
| 1991 | 70 aa hypothetical protein | |||
| 1992 | R | Cst764IIP (100% identity) | GAAYNNNNNTGC | Cst6940IP |
| 1993 | S | S.Cst764II (100% identity) | GAAYNNNNNTGC | S.Cst6940I |
| 1994 | M | M.Cst764II (100% identity) | GAAYNNNNNTGC | M.Cst6940I |
| 1995 | 664 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1202 | RM | Cst764ORF1639P (99% identity) | Cst6940ORF1202P | |
| 1203 | 523 aa hypothetical protein | |||
| 2065 | transcription factor WhiB | |||
| 2066 | M | M.Cst764ORF2496P (100% identity) | M.Cst6940ORF2066P | |
| 2067 | 108 aa hypothetical protein | |||
| 2077 | CRISPR-associated protein, Csf3 family | |||
| 2078 | M | M.Cst764ORF2485P (100% identity) | M.Cst6940ORF2078P | |
| 2079 | phosphoadenosine phosphosulfate reductase family | |||
| 764 | thiamine pyrophosphate enzyme, N-terminal TPP | |||
| 765 | R | Cst764IIIP (100% identity) | GATC | Cst6940IIIP |
| 766 | M | M.Cst764III (100% identity) | GATC | M.Cst6940III |
| 767 | ribosomal protein S20 | |||
| 72 | FAD linked oxidase, C-terminal domain protein | |||
| 73 | R | Cst764ORF1162P (100% identity) | GCCGGC | Cst6940IVP |
| ??? | M | M.Cst764ORF1162P (100% identity) | GCCGGC | M.Cst6940IV |
| 75 | 62 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 563 | 254 aa hypothetical protein | |||
| 564 | M | M.Cst764ORF1472P (100% identity) | M.Cst6940ORF564P | |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | R | Cst764MrrP (74% identity) | Cst6940Mrr2P | |
| 2532 | DNA binding domain, excisionase family | |||
| 2528 | type I restriction modification DNA specificity | |||
| 2529 | R | 76 aa hypothetical protein | Cst6940MrrP | |