Neisseria meningitidis COL-201504-11 |
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Putative Neisseria meningitidis COL-201504-11 RM systems
Ref: Retchless,A.C. and Bazan,J.A. unpublished
REBASE ref # 24294
Complete sequence: 2,195,573 bp
GenBank #: CP017257
REBASE acronym: Nme411
Org_num: 23861
All begin BFO62_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 305 | UDP-glucose 4-epimerase GalE | |||
| 310 | M | M.NmeST254ORF61P (100% identity) | M2.Nme411ORF310P | |
| 315 | M | M1.NmeM395ORFJP (100% identity) | GGTGA | M1.Nme411ORF310P |
| 320 | RNA-binding transcriptional accessory protein | |||
| 1580 | 61 aa hypothetical protein | |||
| 1585 | M | M.NmeS4ORFBP (99% identity) | CCTTC | M.Nme411II |
| 1590 | R | R1.NmeS4ORFBP (100% identity) | CCTTC | Nme411IIAP |
| 1595 | IS30 family transposase | |||
| 1600 | R | R2.NmeS4ORFBP (100% identity) | CCTTC | Nme411IIBP |
| 1605 | 123 aa hypothetical protein | |||
| 1755 | leucine--tRNA ligase | |||
| 1760 | M | M1.NmeS4ORFAP (99% identity) | GATC | M1.Nme411ORF1760P |
| 1765 | M | M2.NmeS4ORFAP (100% identity) | GATC | M2.Nme411ORF1760P |
| 1770 | 184 aa hypothetical protein | |||
| 3605 | phenylalanine--tRNA ligase subunit alpha | |||
| 3610 | V | V.NmeS4ORFGP (100% identity) | V.Nme411ORF3615P | |
| 3615 | M | M.Nme961ORF1427P (100% identity) | M.Nme411ORF3615P | |
| 3620 | R | Nme961ORF1427P (100% identity) | RCCGGY | Nme411ORF3615P |
| 3625 | phenylalanine--tRNA ligase subunit beta | |||
| 4095 | 323 aa hypothetical protein | |||
| 4100 | M | M.NmeS4ORFEP (100% identity) | CCAGA | M.Nme411ORF4100P |
| 4105 | R | NmeS4ORFEP (98% identity) | Nme411ORF4100P | |
| 4110 | ADP-glyceromanno-heptose 6-epimerase | |||
| 5760 | 3-isopropylmalate dehydrogenase | |||
| ??? | R | NmeMBH1ORFHP (100% identity) | GGNNCC | Nme411ORF5775P |
| 5775 | M | M.Nme838ORF7550P (100% identity) | M.Nme411ORF5775P | |
| 5780 | 3-isopropylmalate dehydratase small subunit | |||
| 8090 | alanine--tRNA ligase | |||
| 8095 | R | NmeS4ORFCP (100% identity) | GCGCGC | Nme411ORF8100P |
| 8100 | M | M.NmeS4ORFCP (100% identity) | GCGCGC | M.Nme411ORF8100P |
| 8105 | IS5 family transposase | |||
| 10495 | ATP-dependent helicase | |||
| 10500 | V | V.NmeS4ORFFP (100% identity) | V.Nme411ORF10510P | |
| 10505 | R | NmeS4ORFFP (100% identity) | Nme411ORF10510P | |
| 10510 | M | M.NmeS4ORFFP (100% identity) | CCGG | M.Nme411ORF10510P |
| 10515 | 48 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5145 | alpha-hydroxy-acid oxidizing enzyme | |||
| 5150 | R | NmeS4ORFDP (100% identity) | ACACC | Nme411IP |
| 5155 | M | M.Nme835ORF6330P (100% identity) | ACACC | M.Nme411I |
| 5160 | tRNA pseudouridine(55) synthase TruB | |||
| 5705 | peptidylprolyl isomerase | |||
| 5710 | M | M.NmeS4ORFIP (84% identity) | M.Nme411ORF5710P | |
| 5715 | R | NmeS4ORFIP (100% identity) | Nme411ORF5710P | |
| 5720 | tRNA 2-thiocytidine(32) synthetase TtcA | |||