Streptobacillus moniliformis DSM 12112 |
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Putative Streptobacillus moniliformis DSM 12112 RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 14438
Complete sequence: 1,662,578 bp
GenBank #: CP001779 (NC_013515)
REBASE acronym: SmoL
Org_num: 5635
All begin Smon_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 655 | 215 aa hypothetical protein | |||
| 656 | C | C.Smo310IP (100% identity) | C.SmoLIIIP | |
| 657 | M | M.Smo310I (100% identity) | ATTYNNNNNCTC | M.SmoLIII |
| 658 | S | S.Smo310I (100% identity) | ATTYNNNNNCTC | S.SmoLIII |
| 659 | R | Smo310IP (100% identity) | ATTYNNNNNCTC | SmoLIIIP |
| 660 | 424 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 58 | 407 aa hypothetical protein | |||
| 59 | R | Smo310ORF3945P (86% identity) | GCGC | SmoLORF60P |
| 60 | M | M.Smo310ORF3945P (100% identity) | GCGC | M.SmoLORF60P |
| 61 | 161 aa hypothetical protein | |||
| 87 | pseudogene | |||
| 88 | M | M.Smo310ORF3795P (100% identity) | GTSAC | M.SmoLORF88P |
| 89 | UDP-N-acetylmuramate/alanine ligase | |||
| 100 | 450 aa hypothetical protein | |||
| 101 | R | Smo310ORF3725P (100% identity) | CCGG | SmoLI |
| 102 | M | M.Smo310ORF3725P (98% identity) | CCGG | M.SmoLIP |
| 103 | acyltransferase 3 | |||
| 159 | LrgB family protein | |||
| 160 | M | M.Smo310ORF3435P (100% identity) | GGCC | M.SmoLORF160P |
| 161 | R | Smo310ORF3435P (100% identity) | GGCC | SmoLORF160P |
| 162 | 1346 aa hypothetical protein | |||
| 202 | Beta-glucosidase | |||
| 203 | M | M.Smo310ORF3255P (97% identity) | GCGC | M.SmoLORF203P |
| 204 | outer membrane autotransporter barrel domain | |||
| 288 | 433 aa hypothetical protein | |||
| 289 | M | M.Smo310ORF2775P (100% identity) | CCATC | M.SmoLORF289P |
| 290 | ribosomal protein L28 | |||
| 393 | protein of unknown function UPF0005 | |||
| 394 | M | M.Smo310ORF2230P (100% identity) | GANTC | M.SmoLV |
| 395 | 274 aa hypothetical protein | |||
| 1037 | protein of unknown function DUF163 | |||
| 1038 | M | M2.Smo10651ORF586P (100% identity) | GATC | M1.SmoLVII |
| 1039 | R | Smo310ORF6650P (99% identity) | GATC | SmoLVIIP |
| 1040 | pseudogene | |||
| 1039 | type II restriction endonuclease | |||
| 1040 | M | M1.Smo310ORF6650P (100% identity) | GATC | M2.SmoLORF1038P |
| 1041 | DNA mismatch repair protein MutL | |||
| 1070 | SUF system FeS assembly protein, NifU family | |||
| 1071 | M | M.Smo310III (100% identity) | TCTAGA | M.SmoLVI |
| 1072 | R | Smo310IIIP (100% identity) | TCTAGA | SmoLVIP |
| 1073 | Endonuclease/exonuclease/phosphatase | |||
| 1244 | heavy metal translocating P-type ATPase | |||
| 1245 | M | M.Smo310ORF5530P (89% identity) | GGNNCC | M.SmoLORF1245P |
| 1246 | R | Smo10651ORF358P (100% identity) | GGNNCC | SmoLORF1245P |
| 1247 | N-acetylglucosamine-6-phosphate deacetylase | |||
| 1452 | 176 aa hypothetical protein | |||
| 1453 | M | M2.Smo310ORF4445P (100% identity) | GCAGT | M1.SmoLII |
| 1454 | RM | Smo310ORF4445P (100% identity) | GCAGT | SmoLII |
| 1455 | M | M1.Smo310ORF4445P (100% identity) | GCAGT | M2.SmoLII |
| 1456 | 117 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1417 | 380 aa conserved hypothetical protein | |||
| 1418 | R | Smo310IIP (100% identity) | CGWAG | SmoLIVP |
| 1419 | M | M.Smo310II (100% identity) | CGWAG | M.SmoLIV |
| 1420 | pseudogene | |||