Clostridioides difficile FDAARGOS_267 |
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Putative Clostridioides difficile FDAARGOS_267 RM systems
Ref: Kerrigan,L. et al. unpublished
REBASE ref # 24272
| Sequence length: | GenBank #: | |
| Chromosome: | 4,109,635 bp | CP020424 |
| plasmid unnamed1: | 45,187 bp | CP020425 |
| plasmid unnamed2: | 131,326 bp | CP020426 |
REBASE acronym: Cdi267
Org_num: 23773
All begin A6J95_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13860 | ketose-bisphosphate aldolase | |||
| 13865 | M | M.Pdi9689II (100% identity) | CANNNNNNNTAAAG | M.Cdi267I |
| 13870 | S | S.Pdi9689II (100% identity) | CANNNNNNNTAAAG | S.Cdi267I |
| 13875 | 102 aa hypothetical protein | |||
| 13880 | nucleotidyltransferase domain-containing | |||
| 13885 | 142 aa hypothetical protein | |||
| 13890 | R | Pdi9689IIP (100% identity) | CANNNNNNNTAAAG | Cdi267IP |
| 13895 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13405 | 1078 aa hypothetical protein | |||
| 13410 | M | M.Pdi9689DndEP (100% identity) | M.Cdi267DndEP | |
| 13415 | DNA sulfur modification protein DndD | |||
| 13410 | DUF1832 domain-containing protein | |||
| 13415 | M | M.Pdi9689DndDP (100% identity) | M.Cdi267DndDP | |
| 13420 | DNA phosphorothioation system sulfurtransferase | |||
| 13415 | DNA sulfur modification protein DndD | |||
| 13420 | M | M.Pdi9689DndCP (100% identity) | M.Cdi267DndCP | |
| 13425 | LytTR family transcriptional regulator | |||
| 15165 | Rrf2 family transcriptional regulator | |||
| 15170 | M | M.Pdi9689I (100% identity) | CAAAAA | M.Cdi267II |
| 15175 | phospholipase | |||
| plasmid unnamed1 | ||||
| 19155 | N-acetylmuramoyl-L-alanine amidase | |||
| 19160 | M | M.Pdi9689ORF3833P (100% identity) | M.Cdi267ORF19160P | |
| 19165 | CopY family transcriptional regulator | |||
| plasmid unnamed2 | ||||
| 19810 | PD-(D/E)XK nuclease family protein | |||
| 19815 | M | M.CdiAKORF19810P (100% identity) | M1.Cdi267ORF19815P | |
| 19820 | M | M.Pph1296ORF60P (100% identity) | M2.Cdi267ORF19815P | |
| 19825 | 127 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18670 | cell division protein | |||
| 18675 | R | Pdi9689McrBP (100% identity) | Cdi267McrBP | |
| 18680 | R | Pdi9689McrCP (100% identity) | Cdi267McrCP | |
| 18685 | AAA family ATPase | |||