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Putative Paludisphaera borealis PX4 RM systems
Ref: Ivanova,A.A. et al. Front. Microbiol. 8, 412 (2017)
REBASE ref # 23830
Sequence length: | GenBank #: | |
Chromosome: | 7,497,544 bp | CP019082 |
plasmid PALBO2: | 42,519 bp | CP019084 |
REBASE acronym: PboPX4
Org_num: 22811
All begin BSF38_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1 | metallopeptidase | |||
2 | R | AbrPbN1ORF17190P (68% identity) | CGAGNNNNNNTCGC | PboPX4IP |
3 | S | S.PbaTBK1rORF46050P (45% identity) | CGAGNNNNNNTCGC | S.PboPX4I |
4 | 337 aa hypothetical protein | |||
5 | M | M.Dac2973ORF1334P (75% identity) | CGAGNNNNNNTCGC | M.PboPX4I |
6 | 99 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
2000 | DNA replication and repair protein RecF | |||
2001 | M | M.SzoXJ20ORFOP (63% identity) | M.PboPX4ORF2001P | |
2002 | R | BdiXF19ORF46740P (72% identity) | PboPX4ORF2001P | |
2003 | 343 aa hypothetical protein | |||
2193 | RNA polymerase sigma factor SigA | |||
2194 | M | M.PspPL62ORF7285P (63% identity) | M.PboPX4ORF2194P | |
2195 | 30S ribosomal protein S1 | |||
2344 | alpha/beta-hydrolase-type carbohydrate | |||
2345 | M | M.CspESFC1ORFHP (40% identity) | TTCGAA | M.PboPX4II |
2346 | Methionine--tRNA ligase | |||
3074 | Transcriptional regulatory protein ZraR | |||
3075 | M | M.PspPL62ORF385P (76% identity) | M.PboPX4ORF3075P | |
3076 | 742 aa hypothetical protein | |||
3127 | 145 aa hypothetical protein | |||
3129 | V | V.PspPL62ORF230P (80% identity) | V.PboPX4ORF3130P | |
3130 | M | M.PspPL62ORF230P (74% identity) | M.PboPX4ORF3130P | |
3131 | 232 aa hypothetical protein | |||
3179 | L-glyceraldehyde 3-phosphate reductase | |||
3180 | R | Lsp15MVORFMP (39% identity) | PboPX4ORF3181P | |
3181 | M | M.Sth15344ORF14020P (64% identity) | M.PboPX4ORF3181P | |
3182 | Cobalt-zinc-cadmium resistance protein CzcC | |||
plasmid PALBO2 | ||||
20033 | RecB family exonuclease | |||
20034 | RM | Ael3563ORF9960P (63% identity) | PboPX4ORF20034P | |
20037 | Multifunctional conjugation protein TraI |