Helicobacter bilis AAQJH |
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Putative Helicobacter bilis AAQJH RM systems
Ref: Conlan,S. et al. unpublished
REBASE ref # 21860
Complete sequence: 2,620,399 bp
GenBank #: CP019645
REBASE acronym: HbiAAQJH
Org_num: 23393
All begin XJ32_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6435 | DNA processing protein DprA | |||
| 6440 | M | M.Che9613ORF3135P (94% identity) | M.HbiAAQJHORF6440P | |
| 6445 | 65 aa hypothetical protein | |||
| 6450 | death-on-curing protein | |||
| ??? | S | S.Cup11541ORF1107P (61% identity) | S.HbiAAQJHORF6440P | |
| 6460 | 318 aa hypothetical protein | |||
| 6465 | R | Hwi431ORF3835P (93% identity) | HbiAAQJHORF6440P | |
| 6470 | thioredoxin | |||
| 8650 | cation diffusion facilitator family transporter | |||
| ??? | S | S.Cup3940ORF297P (45% identity) | S.HbiAAQJHORF8670P | |
| 8660 | 86 aa hypothetical protein | |||
| 8665 | 94 aa hypothetical protein | |||
| 8670 | M | M.Csp25113ORF1335P (97% identity) | M.HbiAAQJHORF8670P | |
| 8675 | R | Hfe13101ORF977P (60% identity) | HbiAAQJHORF8670P | |
| 8680 | Crp/Fnr family transcriptional regulator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1015 | 71 aa hypothetical protein | |||
| 1020 | M | M.Cup736ORF5055P (94% identity) | M.HbiAAQJHORF1020P | |
| 1025 | R | Cup11541ORF755P (91% identity) | HbiAAQJHORF1020P | |
| 1030 | 326 aa hypothetical protein | |||
| 1265 | methionyl-tRNA formyltransferase | |||
| 1270 | M | M.Hci94105ORF765P (83% identity) | M.HbiAAQJHORF1270P | |
| 1275 | R | Hci94105ORF765P (98% identity) | HbiAAQJHORF1270P | |
| 1280 | Uncharacterized protein | |||
| 5410 | 4-hydroxy-3-methylbut-2-enyl diphosphate | |||
| ??? | RM | Hci12221ORF1480P (74% identity) | HbiAAQJHORF5415P | |
| 5420 | 73 aa hypothetical protein | |||
| 5730 | 88 aa hypothetical protein | |||
| 5735 | R | Csp25113ORF13P (97% identity) | HbiAAQJHORF5740P | |
| 5740 | M | M2.Che9613ORF6795P (98% identity) | M1.HbiAAQJHORF5740P | |
| 5745 | M | M2.Che51209ORF18P (98% identity) | M2.HbiAAQJHORF5740P | |
| 5750 | 64 aa hypothetical protein | |||
| 5765 | pseudogene | |||
| 5770 | S | S.HmuAORF5150P (54% identity) | S.HbiAAQJHORF5785P | |
| 5775 | Uncharacterized protein | |||
| 5780 | 224 aa hypothetical protein | |||
| 5785 | RM | HbiMUORF9990P (99% identity) | HbiAAQJHORF5785P | |
| 5790 | Uncharacterized protein | |||
| 7875 | 233 aa hypothetical protein | |||
| 7880 | M | M.McaG122ORF3180P (50% identity) | M.HbiAAQJHORF7880P | |
| 7885 | 67 aa hypothetical protein | |||
| 8190 | HNH endonuclease | |||
| 8195 | M | M.Hbi43879ORF1243P (97% identity) | M.HbiAAQJHORF8195P | |
| 8200 | cysteine synthase | |||
| 8235 | alanyl-tRNA synthetase | |||
| 8240 | RM | Che51209ORF1555P (50% identity) | HbiAAQJHORF8240P | |
| 8245 | Uncharacterized protein | |||
| 8495 | cysteine desulfurase | |||
| 8500 | M | M.HciP01DORFZP (53% identity) | M.HbiAAQJHORF8500P | |
| 8505 | 247 aa hypothetical protein | |||
| 8635 | DNA methyltransferase | |||
| ??? | RM | HciT36ORF1020P (74% identity) | HbiAAQJHORFAP | |
| 8645 | UDP-N-acetylmuramoylalanine--D-glutamate ligase | |||
| 9000 | flagellar biosynthesis protein FlhB | |||
| 9005 | M | M.Hbi43879ORF1035P (98% identity) | M.HbiAAQJHORF9005P | |
| 9010 | 218 aa hypothetical protein | |||
| 9105 | adenylosuccinate lyase | |||
| 9110 | RM | HciORF28P (54% identity) | HbiAAQJHORF9110P | |
| 9115 | S | HbiMUORF2080P (25% identity) | S.HbiAAQJHORF9110P | |
| 9120 | 167 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11055 | phosphoserine phosphatase | |||
| 11060 | M | M.Cup11840ORF74P (98% identity) | M.HbiAAQJHORF11060P | |
| 11065 | R | HbiMUORF3930P (98% identity) | HbiAAQJHORF11060P | |
| 11070 | 625 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11065 | DEAD/DEAH box helicase | |||
| 11070 | R | HciT36McrBP (54% identity) | HbiAAQJHMcrBP | |
| 11075 | R | Hci12219McrCP (74% identity) | HbiAAQJHMcrCP | |
| 11080 | Na/Pi-cotransporter | |||