Burkholderia cenocepacia VC12308 |
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Putative Burkholderia cenocepacia VC12308 RM systems
Ref: Lee,A.H. et al. unpublished
REBASE ref # 23799
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,668,000 bp | CP019674 |
| chromosome 2: | 2,984,720 bp | CP019672 |
| plasmid unnamed: | 17,257 bp | CP019671 |
REBASE acronym: Bce12308
Org_num: 22748
All begin A8E75_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 30560 | 306 aa hypothetical protein | |||
| 30565 | M | M.Rin49129ORF11575P (90% identity) | M.Bce12308ORF30565P | |
| 30570 | 122 aa hypothetical protein | |||
| chromosome 2 | ||||
| 4750 | tryptophan synthase subunit beta | |||
| 4755 | M | M.Bcet4ORF24860P (100% identity) | GTWWAC | M.Bce12308ORF4755P |
| 4760 | tryptophan synthase subunit alpha | |||
| plasmid unnamed | ||||
| 25 | transcriptional regulator | |||
| 30 | V | V.Sma27ORF26140P (100% identity) | V.Bce12308ORF40P | |
| 35 | R | Sma27ORF26140P (100% identity) | GGCGCC | Bce12308ORF40P |
| 40 | M | M.Sma27ORF26140P (98% identity) | GGCGCC | M.Bce12308ORF40P |
| 45 | 70 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 35170 | ATP-binding protein | |||
| 35175 | R | Bce23005ORF40P (100% identity) | Bce12308ORF35180P | |
| 35180 | M | M.Bce187III (100% identity) | M.Bce12308ORF35180P | |
| 35185 | 73 aa hypothetical protein | |||
| 35305 | 124 aa hypothetical protein | |||
| 35310 | R | Bce187IP (100% identity) | CACAG | Bce12308ORF35315P |
| ??? | M | M.BspEMB26ORF190P (99% identity) | CACAG | M.Bce12308ORF35315P |
| 35320 | porin | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 35155 | transcriptional regulator | |||
| 35160 | R | Bce187MrrP (100% identity) | Bce12308MrrP | |
| 35165 | transposase | |||