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Putative Vibrio anguillarum VA1 RM systems
Ref: Ronneseth,A. et al. J. Fish Dis. (2017) In press
REBASE ref # 23791
Sequence length: | GenBank #: | |
chromosome I: | 3,060,699 bp | CP010078 |
chromosome II: | 1,067,110 bp | CP010079 |
REBASE acronym: VanVA1
Org_num: 22702
All begin PL83_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
chromosome I | ||||
10560 | resolvase | |||
10565 | S | S.VanT265ORF10575P (98% identity) | S.VanVA1ORF10565P | |
10570 | R | VanT265ORF10575P (100% identity) | VanVA1ORF10565P | |
10575 | restriction endonuclease | |||
12150 | 385 aa hypothetical protein | |||
??? | R | VanT265ORF12195P (100% identity) | VanVA1ORF12185P | |
12160 | abortive phage infection protein | |||
12165 | DNA methylase N-4 | |||
12170 | 68 aa hypothetical protein | |||
12175 | elongation factor Ts | |||
12180 | 132 aa hypothetical protein | |||
12185 | M | M.VanT265ORF12195P (100% identity) | M.VanVA1ORF12185P | |
12190 | glycine/betaine ABC transporter | |||
12195 | integrase | |||
12200 | 99 aa hypothetical protein | |||
12205 | S | S.VanT265ORF12195P (100% identity) | S.VanVA1ORF12185P | |
12210 | 331 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
chromosome I | ||||
2505 | cell division protein DamX | |||
2510 | M | M.VanVIB12DamP (100% identity) | M.VanVA1DamP | |
2515 | ribulose-phosphate 3-epimerase | |||
12160 | abortive phage infection protein | |||
12165 | M | M.Vvu0208ORFCP (94% identity) | M.VanVA1ORF12165P | |
12170 | 68 aa hypothetical protein | |||
chromosome II | ||||
17580 | 95 aa hypothetical protein | |||
17585 | M | M.VanVA1ORF17830P (100% identity) | M.VanVA1ORF17585P | |
17590 | 85 aa hypothetical protein | |||
17825 | 85 aa hypothetical protein | |||
17830 | M | M.VanVA1ORF17585P (100% identity) | M.VanVA1ORF17830P | |
17835 | 95 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
chromosome I | ||||
10570 | restriction endonuclease subunit R | |||
10575 | R | VanT265MrrP (100% identity) | VanVA1MrrP | |
10580 | DNA-binding protein |