Vibrio anguillarum 87-9-116 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Vibrio anguillarum 87-9-116 RM systems
Ref: Ronneseth,A. et al. J. Fish Dis. (2017) In press
REBASE ref # 23791
| Sequence length: | GenBank #: | |
| chromosome I: | 3,060,464 bp | CP010044 |
| chromosome II: | 1,107,066 bp | CP010045 |
REBASE acronym: Van116
Org_num: 22699
All begin PO30_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 10545 | integrase | |||
| ??? | M | M.VanT265ORF10575P (100% identity) | M.Van116ORF10550P | |
| 10555 | 291 aa hypothetical protein | |||
| 10560 | chromosome segregation protein SMC | |||
| ??? | S | S.VanT265ORF10575P (100% identity) | S.Van116ORF10550P | |
| 10570 | R | VanVA1ORF10565P (100% identity) | Van116ORF10550P | |
| 10575 | restriction endonuclease | |||
| 12140 | 385 aa hypothetical protein | |||
| ??? | R | VanVA1ORF12185P (100% identity) | Van116ORF12175P | |
| 12150 | abortive phage infection protein | |||
| 12155 | DNA methylase N-4 | |||
| 12160 | 68 aa hypothetical protein | |||
| 12165 | elongation factor Ts | |||
| 12170 | 132 aa hypothetical protein | |||
| 12175 | M | M.VanVA1ORF12185P (99% identity) | M.Van116ORF12175P | |
| 12180 | 0 aa hypothetical protein | |||
| 12185 | S | S.VanVA1ORF12185P (100% identity) | S.Van116ORF12175P | |
| 12190 | 331 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 2520 | cell division protein DamX | |||
| 2525 | M | M.VanVIB12DamP (100% identity) | M.Van116DamP | |
| 2530 | ribulose-phosphate 3-epimerase | |||
| 12150 | abortive phage infection protein | |||
| 12155 | M | M.Vvu0208ORFCP (94% identity) | M.Van116ORF12155P | |
| 12160 | 68 aa hypothetical protein | |||
| chromosome II | ||||
| 17520 | 95 aa hypothetical protein | |||
| 17525 | M | M.VanVA1ORF17830P (100% identity) | M.Van116ORF17525P | |
| 17530 | 85 aa hypothetical protein | |||
| 17735 | 95 aa hypothetical protein | |||
| 17740 | M | M.VanVA1ORF17830P (100% identity) | M.Van116ORF17740P | |
| 17745 | 85 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 10570 | restriction endonuclease subunit R | |||
| 10575 | R | VanVA1MrrP (100% identity) | Van116MrrP | |
| 10580 | DNA-binding protein | |||