Clostridioides difficile LEM1 |
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Putative Clostridioides difficile LEM1 RM systems
Ref: Etienne-Mesmin,L. et al. unpublished
REBASE ref # 23927
Complete sequence: 4,191,506 bp
GenBank #: CP019469
REBASE acronym: CdiLEM1
Org_num: 23135
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.CdiS122ORF3110P (100% identity) | ATTYNNNNNCTTC | M.CdiLEM1ORFGP |
| ??? | S | S.Pdi30ORF18845P (100% identity) | ATTYNNNNNCTTC | S.CdiLEM1ORFGP |
| ??? | R | Pdi30ORF18845P (100% identity) | ATTYNNNNNCTTC | CdiLEM1ORFGP |
| ??? | M | M.Pdi30ORF18320P (100% identity) | M.CdiLEM1ORFDP | |
| ??? | S | S.Pdi30ORF18320P (77% identity) | S1.CdiLEM1ORFDP | |
| ??? | S | Type I restriction enzyme S subunit | S2.CdiLEM1ORFDP | |
| ??? | R | Pdi30ORF18320P (97% identity) | CdiLEM1ORFDP | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M2.Pdi30ORF18765P (100% identity) | CATCG | M1.CdiLEM1ORFFP |
| ??? | M | M1.Pdi30ORF18765P (100% identity) | CATCG | M2.CdiLEM1ORFFP |
| ??? | M | M.Pdi6602ORF710333P (100% identity) | M.CdiLEM1ORFEP | |
| ??? | M | M.PdiZ31ORF1541P (100% identity) | M.CdiLEM1ORFCP | |
| ??? | M | M.CdiS0352ORF4245P (100% identity) | M.CdiLEM1ORFBP | |
| ??? | M | M.CdiS122ORF7470P (95% identity) | M.CdiLEM1ORFAP | |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | R | Pdi30McrBP (89% identity) | CdiLEM1McrBP | |
| ??? | R | Pdi30McrCP (100% identity) | CdiLEM1McrCP | |