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Putative Cuniculiplasma divulgatum PM4 (=JCM 30641; RM systems
Ref: Toshchakov,V.S. unpublished
REBASE ref # 23625
Complete sequence: 1,878,916 bp
GenBank #: LT719092
REBASE acronym: CdiPM4
Org_num: 22739
All begin CPM_
Type II | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
557 | 88 aa hypothetical protein | |||
558 | R | AflGORF8605P (69% identity) | GGATG | CdiPM4ORF559P |
559 | M | type IIS restriction-modification system DNA | GGATG | M1.CdiPM4ORF559P |
560 | M | M2.AflGORF8605P (48% identity) | GGATG | M2.CdiPM4ORF559P |
561 | MazF toxin | |||
586 | heavy metal reductase | |||
587 | M | M.UbaMDORFY8P (100% identity) | M.CdiPM4ORF587P | |
588 | DNA gyrase subunit B | |||
874 | 391 aa hypothetical protein | |||
876 | M | M.UbaMDORFU6P (99% identity) | M.CdiPM4ORF876P | |
877 | 93 aa hypothetical protein | |||
1387 | ArsR family transcriptional regulator | |||
1388 | M | M.Cdi30642ORF1389P (98% identity) | M.CdiPM4ORF1388P | |
1389 | DNA-directed RNA polymerase subunit L | |||
1426 | 257 aa hypothetical protein | |||
1427 | RM | UbaMDORFW9P (49% identity) | CdiPM4ORF1427P | |
1428 | integrase | |||
1580 | cupin | |||
1581 | M | M.Cdi30642ORF1591P (98% identity) | M.CdiPM4ORF1581P | |
1582 | 307 aa hypothetical protein | |||
1759 | Orc1/Cdc6 family replication initiation protein | |||
1760 | RM | UbaMDORFM11P (90% identity) | CdiPM4ORF1760P | |
1761 | XRE family transcriptional regulator fused to Zn | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
52 | metal-dependent hydrolase of the beta-lactamase | |||
53 | M | M.UbaMDORFR1P (51% identity) | M.CdiPM4ORF53P | |
54 | R | Cdi30642ORF85P (99% identity) | CdiPM4ORF53P | |
55 | pseudogene | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
89 | VapC toxin | |||
90 | R | Cdi30642ORF121P (99% identity) | CdiPM4ORF90P | |
91 | nucleotidyltransferase toxin |