Escherichia coli WCHEC1613 |
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Putative Escherichia coli WCHEC1613 RM systems
Ref: Zhao,F. et al. unpublished
REBASE ref # 24116
| Sequence length: | GenBank #: | |
| Chromosome: | 4,669,790 bp | CP019213 |
| plasmid pI1_WCHEC1613: | 84,615 bp | CP019215 |
| plasmid pMCR_WCHEC1613: | 289,260 bp | CP019214 |
| plasmid pP_WCHEC1613: | 78,444 bp | CP019216 |
REBASE acronym: Eco1613
Org_num: 23084
All begin BVJ48_, DBA32_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9815 | 410 aa hypothetical protein | |||
| 9820 | M | M.EcoSHP24ORF10835P (100% identity) | M.Eco1613ORF24145P | |
| 9825 | S | S.Eco2097ORF1792P (99% identity) | S.Eco1613ORF24145P | |
| 9830 | YecA family protein | |||
| 9835 | cold shock domain-containing protein | |||
| 9840 | R | CweLHC51ORF9785P (100% identity) | Eco1613ORF24145P | |
| 9845 | M48 family metallopeptidase | |||
| 9890 | IS1 family transposase | |||
| 9895 | M | M.SflLIN17ORF9030P (100% identity) | M.Eco1613ORF24070P | |
| 9900 | S | S.EcoGD33ORF9635P (100% identity) | S.Eco1613ORF24070P | |
| 9905 | R | Csa684ORF12305P (99% identity) | Eco1613ORF24070P | |
| 9910 | M48 family metallopeptidase | |||
| 15070 | GTPase family protein | |||
| 15075 | M | M.SflFF35ORF18280P (66% identity) | M.Eco1613ORF15075P | |
| 15080 | IS5-like element IS903B family transposase | |||
| 18705 | IS5 family transposase | |||
| 18710 | M | M.EcoXHORF21684AP (98% identity) | M.Eco1613ORF18710P | |
| 18715 | 50S ribosome-binding GTPase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1755 | cell division protein DamX | |||
| 1760 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco1613DamP |
| 1765 | ribulose-phosphate 3-epimerase | |||
| 2415 | DUF2556 domain-containing protein | |||
| 2420 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.Eco1613ORF6935P |
| 2425 | DNA-binding transcriptional regulator Fis | |||
| 7090 | recombination protein NinB | |||
| 7095 | M | M.SflN97ORF15810P (100% identity) | GATC | M.Eco1613ORF2115P |
| 7100 | NinE family protein | |||
| 9485 | HD domain-containing protein | |||
| 9490 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.Eco1613DcmP |
| 9495 | V | V.SflSTLE3DcmP (100% identity) | V.Eco1613DcmP | |
| 9500 | drug/metabolite exporter YedA | |||
| plasmid pI1_WCHEC1613 | ||||
| 25890 | 101 aa hypothetical protein | |||
| 25895 | M | M.SflFF3ORF25360P (100% identity) | M.Eco1613ORF26615P | |
| 25900 | 73 aa hypothetical protein | |||
| plasmid pMCR_WCHEC1613 | ||||
| 24910 | DUF1173 domain-containing protein | |||
| 24915 | M | M.YpsF1ORFCP (100% identity) | M.Eco1613ORF25015P | |
| 24920 | thermonuclease family protein | |||
| 25605 | 108 aa hypothetical protein | |||
| 25610 | M | M.YpsF1ORFBP (100% identity) | M.Eco1613ORF25945P | |
| 25615 | 202 aa hypothetical protein | |||
| 25725 | DNA-binding protein | |||
| 25730 | M | M.YpsF1ORFDP (100% identity) | M.Eco1613ORF25820P | |
| 25735 | 284 aa hypothetical protein | |||
| plasmid pP_WCHEC1613 | ||||
| 26750 | IS1 family transposase | |||
| 26755 | R | EcoPSJ29ORF43810P (100% identity) | GCWGC | Eco1613ORF27160P |
| 26760 | XRE family transcriptional regulator | |||