Helicobacter pylori MKM6 |
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Putative Helicobacter pylori MKM6 RM systems
Ref: Kojima,K.K. et al. Mol. Biol. Evol. 33 (11), 2848-2859 (2016)
REBASE ref # 23119
Complete sequence: 1,577,123 bp
GenBank #: AP017362
REBASE acronym: HpyMKM6
Org_num: 22630
All begin HPMKM6_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 460 | polyphosphate kinase | |||
| 461 | S | S.HpyT014ORF2315P (98% identity) | S.HpyMKM6ORF462P | |
| 462 | M | M.Hpyfe5ORF5065P (97% identity) | M.HpyMKM6ORF462P | |
| ??? | R | HpyUM085ORF90P (94% identity) | HpyMKM6ORF462P | |
| 465 | uncharacterized protein | |||
| 788 | outer membrane protein HofF | |||
| 789 | S | S1.HpyMKM6ORF849P (100% identity) | S1.HpyMKM6ORF789P | |
| ??? | S | S2.HpyMKM6ORF849P (100% identity) | S2.HpyMKM6ORF789P | |
| 791 | cadmium-transporting ATPase, P-type | |||
| 845 | hydroxyethylthiazole kinase | |||
| 846 | R | HpyTN2ORF5590P (97% identity) | HpyMKM6ORF849P | |
| 847 | S | S1.HpyMKM6ORF789P (100% identity) | S1.HpyMKM6ORF849P | |
| ??? | S | S2.HpyMKM6ORF789P (100% identity) | S2.HpyMKM6ORF849P | |
| 849 | M | M.Hpy78ORF536P (97% identity) | M.HpyMKM6ORF849P | |
| 850 | integral membrane protein | |||
| 1371 | DNA polymerase I | |||
| 1372 | S | S.HpyCHN10ORF7035P (64% identity) | S1.HpyMKM6ORF1372P | |
| 1373 | S | S.HpyUM084ORF1905P (25% identity) | S2.HpyMKM6ORF1372P | |
| 1374 | type II restriction modification enzyme | |||
| 1437 | FAD-dependent thymidylate synthase | |||
| ??? | S | S.HpyC104ORF3000P (57% identity) | S.HpyMKM6ORF1442P | |
| 1440 | uncharacterized protein | |||
| 1441 | uncharacterized protein | |||
| 1442 | M | M.Hpy23ORF1426P (97% identity) | M.HpyMKM6ORF1442P | |
| ??? | R | HpyJA101ORF7205P (97% identity) | HpyMKM6ORF1442P | |
| 1445 | phosphonate metabolism protein PhnI | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 50 | nicotinate-nucleotide pyrophosphorylase | |||
| 51 | RM | Hpy1838CORF530P (66% identity) | HpyMKM6ORF51AP | |
| 51 | RM | adenine specific DNA methyltransferase | HpyMKM6ORF51BP | |
| ??? | RM | Uncharacterized protein | HpyMKM6ORF51CP | |
| 52 | protease | |||
| 59 | terC family integral membrane protein | |||
| 60 | M | M.HpyJSHR3ORF2070P (88% identity) | CCTC | M1.HpyMKM6ORF60P |
| ??? | M | M2.HpyPF16ORF315P (99% identity) | CCTC | M2.HpyMKM6ORF60P |
| 63 | sodium/proline symporter | |||
| 147 | alpha-1,2-fucosyltransferase | |||
| 148 | M | M.HpyK045II (98% identity) | GATC | M.HpyMKM6ORF148P |
| 149 | R | HpyJF13ORF148P (95% identity) | GATC | HpyMKM6ORF148P |
| 150 | malonyl coenzyme A-acyl carrier protein | |||
| 287 | exodeoxyribonuclease VII large subunit | |||
| 288 | R | HpyPF16IVP (98% identity) | CCGG | HpyMKM6ORF289P |
| 289 | M | M.HpyF225ORFAP (100% identity) | CCGG | M.HpyMKM6ORF289P |
| 290 | ATP-dependent protease binding subunit | |||
| 375 | GTP-binding protein LepA | |||
| 376 | M | M.Hpyoh1ORF4535P (100% identity) | M.HpyMKM6ORF376P | |
| 377 | uncharacterized protein | |||
| 478 | outer membrane protein HopK | |||
| 479 | M | M.HpyP30ORFQP (99% identity) | ATTAAT | M.HpyMKM6ORF479P |
| 480 | type II adenine specific methyltransferase | |||
| 481 | GTP-binding protein TypA | |||
| ??? | M | M.Hpyfe85ORF4785P (94% identity) | ACNGT | M.HpyMKM6ORF482P |
| 485 | R | HpyJA114IIP (100% identity) | ACNGT | HpyMKM6ORF482P |
| 486 | DNA cytosine methyltransferase | |||
| 485 | type II restriction endonuclease | |||
| 486 | M | M.Hpyfe96ORF4835P (99% identity) | ACGT | M.HpyMKM6ORF486P |
| 487 | R | Hpyfe66ORF4755P (89% identity) | ACGT | HpyMKM6ORF486P |
| 488 | catalase-like protein | |||
| 505 | DNA gyrase subunit B | |||
| 506 | M | M.HpyM5CORFYP (99% identity) | GTAC | M.HpyMKM6ORF506P |
| 507 | R | Hpyfe93ORF3025P (98% identity) | GTAC | HpyMKM6ORF506P |
| 508 | outer membrane protein | |||
| 900 | flagellar hook protein FlgE | |||
| 901 | R | HpyGU1CORFQP (97% identity) | GTNNAC | HpyMKM6ORF902P |
| 902 | M | M.HpyK021VII (97% identity) | GTNNAC | M.HpyMKM6ORF902P |
| 903 | rep helicase, single-stranded DNA-dependent | |||
| 1033 | biotin carboxylase | |||
| 1034 | M | M.HpyMA05ORF5200P (99% identity) | M.HpyMKM6ORF1034P | |
| ??? | R | HpyF228ORFPP (100% identity) | HpyMKM6ORF1034P | |
| 1037 | laminin subunit alpha-2 precursor | |||
| 1066 | uncharacterized protein | |||
| 1067 | M | M.Hpy72ORF1073P (99% identity) | GCGC | M.HpyMKM6ORF1067P |
| 1068 | flgM protein | |||
| 1153 | haloacid dehalogenase-like hydrolase | |||
| 1154 | M | M.HpyOK316ORFCP (99% identity) | CATG | M.HpyMKM6ORF1154P |
| 1155 | iceA2 protein | |||
| 1373 | type IIS restriction enzyme protein | |||
| 1374 | RM | Hpy67ORF1398P (99% identity) | HpyMKM6ORF1374P | |
| 1375 | hP1473-transformation associated protein | |||
| 1400 | permease; membrane protein | |||
| 1401 | M | M1.HpyGU1CORFUP (100% identity) | CCATC | M1.HpyMKM6ORF1401P |
| ??? | M | M1.HpyJSHR6ORF310P (100% identity) | CCATC | M2.HpyMKM6ORF1401P |
| ??? | R | Hpy24ORF1399P (99% identity) | HpyMKM6ORF1401P | |
| 1406 | outer membrane protein | |||
| 1422 | uncharacterized protein | |||
| 1423 | RM | HpyOK306ORFIP (88% identity) | HpyMKM6ORF1423P | |
| 1424 | type III restriction enzyme R protein | |||
| 1462 | uncharacterized protein | |||
| 1463 | M | M.Hpyfe61ORF7600P (99% identity) | TGCA | M.HpyMKM6ORF1463P |
| 1464 | R | HpyM6CORFCP (98% identity) | TGCA | HpyMKM6ORF1463P |
| 1465 | uncharacterized protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 35 | rod shape-determining protein MreC | |||
| 36 | R | HpyP30ORFJP (98% identity) | HpyMKM6ORF37P | |
| ??? | M | M.HpyPE19ORF6555P (96% identity) | M.HpyMKM6ORF37P | |
| 40 | transcriptional regulator | |||
| 1303 | endonuclease | |||
| 1304 | M | M.Hpy154ORF6975P (97% identity) | M.HpyMKM6ORF1304P | |
| 1305 | R | HpySG07XIIIP (89% identity) | HpyMKM6ORF1304P | |
| 1306 | biotin synthase | |||
| 1423 | type IIG restriction-modification enzyme | |||
| 1424 | R | HpyJ019ORF7220P (97% identity) | HpyMKM6ORF1425P | |
| ??? | M | M.HpyF233ORFBP (89% identity) | M.HpyMKM6ORF1425P | |
| 1427 | ATP-dependent DNA helicase RecG | |||