Salmonella enterica subsp. enterica serovar Mbandaka ATCC 51958 |
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Putative Salmonella enterica subsp. enterica serovar Mbandaka ATCC 51958 RM systems
Ref: Timme,R.E. et al. Genome Biol Evol 5 (11), 2109-2123 (2013)
REBASE ref # 17417
Complete sequence: 4,905,181 bp
GenBank #: CP019183
REBASE acronym: Sen51958
Org_num: 22593
All begin SEEM1958_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20745 | 375 aa hypothetical protein | |||
| 20750 | R | Sbo48ORF20240P (99% identity) | CTANNNNNNNNRTDCC | Sen51958IP |
| 20755 | M | M.CfrR47ORF11150P (99% identity) | CTANNNNNNNNRTDCC | M.Sen51958I |
| 20760 | S | S.CfrLORF20550P (70% identity) | CTANNNNNNNNRTDCC | S.Sen51958I |
| 20765 | 106 aa hypothetical protein | |||
| 20920 | restriction endonuclease subunit M | |||
| 20925 | R | SenSA5ORF17266P (98% identity) | Sen51958ORF20920P | |
| 20930 | S | S.EcoFHI37ORFAP (53% identity) | S.Sen51958ORF20920P | |
| 20935 | transposase | |||
| 20940 | transposase | |||
| 20945 | S | S.EcosA33III (44% identity) | S.Sen51958ORF20950P | |
| 20950 | M | M2.Yen3502ORF590P (98% identity) | M2.Sen51958ORF20950P | |
| 20955 | M | M1.KpnRE14ORF4532P (99% identity) | M1.Sen51958ORF20950P | |
| 20960 | molecular chaperone Tir | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1880 | cell division protein DamX | |||
| 1885 | M | M.StyTDamP (100% identity) | M.Sen51958DamP | |
| 1890 | ribulose-phosphate 3-epimerase | |||
| 2385 | DUF2556 domain-containing protein | |||
| 2390 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen51958III |
| 2395 | Fis family transcriptional regulator | |||
| 6165 | DNA polymerase III subunit epsilon | |||
| 6170 | M | M.SenC2217ORF6395P (99% identity) | M.Sen51958ORF6170P | |
| 6175 | endonuclease | |||
| 9805 | transposase | |||
| 9810 | M | M.EcoS7438ORFBP (96% identity) | M.Sen51958ORF9810P | |
| 9815 | 153 aa hypothetical protein | |||
| 10230 | phosphohydrolase | |||
| 10235 | M | M.SenSARA26DcmP (99% identity) | CCWGG | M.Sen51958DcmP |
| 10240 | V | V.StyUK1DcmP (100% identity) | V.Sen51958DcmP | |
| 10245 | drug/metabolite exporter YedA | |||
| 21970 | HNH endonuclease | |||
| 21975 | M | DNA cytosine methyltransferase | M.Sen51958ORF21975P | |
| 21980 | 24 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18430 | cytochrome ubiquinol oxidase subunit I | |||
| 18435 | R | StyUK1IP (99% identity) | CAGAG | Sen51958IIP |
| 18440 | M | M.SspsA7ORF16840P (100% identity) | CAGAG | M.Sen51958II |
| 18445 | MFS transporter | |||