Gardnerella vaginalis GV37 |
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Putative Gardnerella vaginalis GV37 RM systems
Ref: Tankovic,J. et al. unpublished
REBASE ref # 23766
Complete sequence: 1,746,718 bp
GenBank #: CP019058
REBASE acronym: Gva37
Org_num: 22579
All begin BVL65_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 945 | thiamine biosynthesis protein ApbE | |||
| 950 | M | M.Gsp1001I (98% identity) | M.Gva37ORF950P | |
| 955 | S | S.Gsp1001I (48% identity) | S.Gva37ORF950P | |
| 960 | R | Gsp1189ORF5130P (97% identity) | Gva37ORF950P | |
| 965 | iron permease | |||
| 3235 | hexulose-6-phosphate isomerase | |||
| 3240 | M | M.Gsp127II (100% identity) | M.Gva37ORF3240P | |
| 3245 | S | S2.Gva8017BORF891P (100% identity) | S1.Gva37ORF3240P | |
| 3250 | S | S1.Gva8017BORF891P (100% identity) | S2.Gva37ORF3240P | |
| 3255 | integrase | |||
| 3260 | S | S2.GvaFY17ORF4565P (88% identity) | S3.Gva37ORF3240P | |
| 3265 | R | Gsp127IIP (100% identity) | Gva37ORF3240P | |
| 3270 | 245 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2730 | S-adenosylmethionine synthetase | |||
| 2735 | M | M.Gsp1198PORF3720P (99% identity) | M.Gva37ORF2735P | |
| 2740 | virulence protein | |||
| 3100 | excisionase | |||
| ??? | M | M1.Gva51ORF1135P (100% identity) | M1.Gva37ORF3105P | |
| 3110 | M | M2.Gva409ORF534P (100% identity) | M2.Gva37ORF3105P | |
| 3115 | ATPase | |||
| 4235 | S-adenosylmethionine synthetase | |||
| 4240 | M | M.GvaUGORFAP (99% identity) | M.Gva37ORF4240P | |
| 4245 | virulence protein | |||
| 4520 | 252 aa hypothetical protein | |||
| 4525 | RM | Gsp1180PORF3270P (99% identity) | Gva37ORF4525P | |
| 4530 | ATPase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2860 | recombinase family protein | |||
| 2865 | R | GvaB513MrrP (94% identity) | Gva37MrrP | |
| 2870 | 62 aa hypothetical protein | |||