Salmonella enterica subsp. enterica serovar Thompson CFSAN000738 |
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Putative Salmonella enterica subsp. enterica serovar Thompson CFSAN000738 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 23771
Complete sequence: 4,710,704 bp
GenBank #: CP019196
REBASE acronym: Sen0738
Org_num: 22597
All begin BVH07_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19985 | 322 aa hypothetical protein | |||
| 19990 | R | Spy5740IP (100% identity) | AGANNNNNNNNCTGG | Sen0738IP |
| 19995 | M | M.Spy5740I (100% identity) | AGANNNNNNNNCTGG | M.Sen0738I |
| 20000 | S | S.Spy5740I (100% identity) | AGANNNNNNNNCTGG | S.Sen0738I |
| 20005 | 106 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1855 | cell division protein DamX | |||
| 1860 | M | DNA adenine methylase | GATC | M.Sen0738Dam |
| 1865 | ribulose-phosphate 3-epimerase | |||
| 2365 | DUF2556 domain-containing protein | |||
| 2370 | M | M.SenThORF2290P (100% identity) | ATGCAT | M.Sen0738IV |
| 2375 | Fis family transcriptional regulator | |||
| 9285 | phosphohydrolase | |||
| 9290 | M | M.SspZ54DcmP (100% identity) | CCWGG | M.Sen0738Dcm |
| 9295 | V | very short patch repair endonuclease | CCWGG | V.Sen0738DcmP |
| 9300 | drug/metabolite exporter YedA | |||
| 20160 | 239 aa hypothetical protein | |||
| 20165 | R | Spy5740IVP (100% identity) | GGTACC | Sen0738IIIP |
| 20170 | M | M.Spy5740IV (100% identity) | GGTACC | M.Sen0738III |
| 20175 | 202 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17615 | cytochrome ubiquinol oxidase subunit I | |||
| ??? | R | Ssp15303ORFGP (99% identity) | CAGAG | Sen0738IIP |
| 17625 | M | M.Spy5740II (100% identity) | CAGAG | M.Sen0738II |
| 17630 | MFS transporter | |||