Salmonella enterica subsp. enterica serovar Chester ATCC 11997 |
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Putative Salmonella enterica subsp. enterica serovar Chester ATCC 11997 RM systems
Ref: Timme,R.E. et al. Genome Biol Evol 5 (11), 2109-2123 (2013)
REBASE ref # 17417
Complete sequence: 4,660,922 bp
GenBank #: CP019178
REBASE acronym: Sen11997
Org_num: 22590
All begin SEECH997_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20290 | malate transporter | |||
| 20295 | R | SenR3019ORFDP (100% identity) | CCANNNNNGRTG | Sen11997IP |
| 20300 | M | M.SenR3019ORFDP (100% identity) | CCANNNNNGRTG | M.Sen11997I |
| 20305 | S | S.Sen74111ORF19105P (42% identity) | CCANNNNNGRTG | S1.Sen11997I |
| 20310 | S | S.SenR3019ORFDP (47% identity) | CCANNNNNGRTG | S2.Sen11997I |
| 20315 | 5-nucleotidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1795 | cell division protein DamX | |||
| 1800 | M | DNA adenine methylase | GATC | M.Sen11997DamP |
| 1805 | ribulose-phosphate 3-epimerase | |||
| 2310 | DUF2556 domain-containing protein | |||
| 2315 | M | adenine-specific DNA-methyltransferase | ATGCAT | M.Sen11997III |
| 2320 | Fis family transcriptional regulator | |||
| 5620 | 75 aa hypothetical protein | |||
| 5625 | M | M.SenUA05ORF3693P (100% identity) | GATC | M.Sen11997ORF5625P |
| 5630 | endonuclease | |||
| 7910 | 160 aa hypothetical protein | |||
| 7915 | M | M.SenST278ORF5850P (99% identity) | M.Sen11997ORF7915P | |
| 7920 | 129 aa hypothetical protein | |||
| 9355 | phosphohydrolase | |||
| 9360 | M | M.SenST203DcmP (100% identity) | CCWGG | M.Sen11997DcmP |
| 9365 | V | very short patch repair endonuclease | V.Sen11997DcmP | |
| 9370 | drug/metabolite exporter YedA | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17680 | cytochrome ubiquinol oxidase subunit I | |||
| 17685 | R | Ssp918ORF16945P (99% identity) | CAGAG | Sen11997IIP |
| 17690 | M | M.SspsA7ORF16840P (100% identity) | CAGAG | M.Sen11997II |
| 17695 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13450 | isocitrate dehydrogenase | |||
| 13455 | R | SsoSE61ORF22640P (99% identity) | YCGR | Sen11997McrAP |
| 13460 | DNA-invertase | |||