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Putative Salmonella enterica subsp. enterica serovar Heidelberg SARA35 RM systems
Ref: Timme,R.E. et al. Genome Biol Evol 5 (11), 2109-2123 (2013)
REBASE ref # 17417
Complete sequence: 4,751,206 bp
GenBank #: CP019176
REBASE acronym: Sen35
Org_num: 22588
All begin SEEHRA35_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
20580 | restriction endonuclease | |||
20585 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen35IP |
20590 | M | M.Sens12373ORF19415P (100% identity) | GAGNNNNNNRTAYG | M.Sen35I |
20595 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen35I |
20600 | 110 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
1840 | cell division protein DamX | |||
1845 | M | M.StyTDamP (100% identity) | GATC | M.Sen35DamP |
1850 | ribulose-phosphate 3-epimerase | |||
2345 | DUF2556 domain-containing protein | |||
2350 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen35ORF2350P |
2355 | Fis family transcriptional regulator | |||
9400 | phosphohydrolase | |||
9405 | M | M.SenZ223DcmP (100% identity) | CCWGG | M.Sen35DcmP |
9410 | V | V.StyTDcmP (100% identity) | V.Sen35DcmP | |
9415 | drug/metabolite exporter YedA | |||
14710 | exonuclease | |||
14715 | M | M.Sens12373ORF14090P (100% identity) | GATC | M.Sen35ORF14715P |
14720 | 81 aa hypothetical protein | |||
20775 | RM | Sens12373ORF19575P (100% identity) | GATCAG | Sen35ORF20775P |
20780 | helicase | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
17925 | cytochrome ubiquinol oxidase subunit I | |||
17930 | R | Sens12373ORF17180P (99% identity) | CAGAG | Sen35IIP |
17935 | M | M.SenZ223ORF2150P (100% identity) | CAGAG | M.Sen35II |
17940 | MFS transporter | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
20575 | 95 aa hypothetical protein | |||
20580 | R | StyUK1MrrP (100% identity) | Sen35MrrP | |
20585 | type I restriction-modification system |