Methylococcus capsulatus str. Bath |
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Putative Methylococcus capsulatus str. Bath RM systems
Ref: Ward,N. et al. PLoS Biol. 2 (10), E303 (2004)
REBASE ref # 8739
Complete sequence: 3,304,561 bp
GenBank #: AE017282 (NC_002977)
REBASE acronym: McaT
Org_num: 4003
All begin MCA
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 268 | ammonium transporter | |||
| 269 | M | conserved domain protein | M.McaTORF269P | |
| 270 | nucleotidyltransferase domain protein | |||
| 271 | conserved domain protein | |||
| 272 | S | type I restriction-modification system, S | S.McaTORF269P | |
| 273 | conserved domain protein | |||
| 833 | response regulator | |||
| ??? | M | M.McaBHORF4510P (82% identity) | M.McaTORF834P | |
| 835 | fic family protein | |||
| 836 | S | S.DgeDORF2017P (59% identity) | S.McaTORF834P | |
| 837 | 206 aa conserved hypothetical protein | |||
| 838 | R | DgeDORF2017P (74% identity) | McaTORF834P | |
| 839 | 192 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 245 | 67 aa hypothetical protein | |||
| 246 | M | M.McaTexORFGP (99% identity) | RGATCY | M.McaTIII |
| 247 | cysteine desulfurase | |||
| 1615 | site-specific recombinase, resolvase family | |||
| 1616 | M | M.Ave16549ORFCP (63% identity) | GCGCGC | M.McaTI |
| 1617 | R | PprDORF3855P (64% identity) | GCGCGC | McaTI |
| ??? | V | V.Mci1284ORF4055P (56% identity) | V.McaTIP | |
| 1619 | trypsin domain protein | |||
| 2653 | 111 aa conserved hypothetical protein | |||
| 2654 | M | M2.SmcB1ORF705P (78% identity) | M.McaTORF2655P | |
| 2655 | prophage LambdaMc01, DNA methyltransferase | |||
| 2654 | prophage LambdaMc01, DNA methyltransferase | |||
| 2655 | M | M1.RmaB10ORF15135P (91% identity) | AB | M.McaTII |
| 2656 | 196 aa conserved hypothetical protein | |||
| 2899 | endonuclease III | |||
| 2900 | M | M.McaI01ORF11940P (84% identity) | M.McaTORF2900P | |
| 2901 | 227 aa hypothetical protein | |||
| 3007 | 114 aa conserved hypothetical protein | |||
| 3008 | M | M.McaKN2ORF8260P (93% identity) | M.McaTORF3008P | |
| 3009 | PHP N-terminal domain protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 25 | glucose-6-phosphate 1-dehydrogenase | |||
| 26 | R | McaBCSORFAP (95% identity) | McaTORF29P | |
| 27 | ISMca5, transposase | |||
| 28 | nucleotidyltransferase family protein | |||
| ??? | M | M.McaBCSORFAP (69% identity) | M.McaTORF29P | |
| 31 | ISMca6, transposase, OrfA | |||
| 549 | RNA methyltransferase, TrmH family | |||
| 550 | M | M.McaMIRORF7575P (70% identity) | M.McaTORF550P | |
| 551 | R | McaI01ORF3790P (95% identity) | McaTORF550P | |
| 552 | 764 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 120 | membrane protein | |||
| 121 | R | McaTexMcrB2P (71% identity) | McaTMcrBP | |
| 122 | 326 aa conserved hypothetical protein | |||