Xanthomonas gardneri JS749-3 |
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Putative Xanthomonas gardneri JS749-3 RM systems
Ref: Richard,D. unpublished
REBASE ref # 23524
Complete sequence: 5,158,913 bp
GenBank #: CP018728
REBASE acronym: Xga7493
Org_num: 22035
All begin BJD10_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 8890 | restriction endonuclease | |||
| 8895 | R | Xga8129ORF32420P (100% identity) | Xga7493ORF8910P | |
| 8900 | anticodon nuclease | |||
| 8905 | S | S.Xga8129ORF32420P (100% identity) | S.Xga7493ORF8910P | |
| 8910 | M | M.Xga8129ORF32420P (100% identity) | M.Xga7493ORF8910P | |
| 8915 | DNA-binding protein | |||
| 18985 | 195 aa hypothetical protein | |||
| 18990 | M | M.Xga8129ORF12740P (100% identity) | M.Xga7493ORF18990P | |
| 18995 | damage-inducible protein D | |||
| 19000 | 158 aa hypothetical protein | |||
| 19005 | S | S.Xga8129ORF12740P (100% identity) | S.Xga7493ORF18990P | |
| 19010 | R | Xga8129ORF12740P (100% identity) | Xga7493ORF18990P | |
| 19015 | metal-dependent hydrolase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2825 | exodeoxyribonuclease V subunit beta | |||
| 2830 | M | M.Xho778ORF285P (69% identity) | YGGCCR | M.Xga7493ORF2830P |
| 2835 | cell filamentation protein Fic | |||
| 5465 | 107 aa hypothetical protein | |||
| 5470 | RM | Xga8129ORF39260P (98% identity) | Xga7493ORF5470AP | |
| 5475 | 68 aa hypothetical protein | |||
| 5480 | RM | type III restriction endonuclease subunit R | Xga7493ORF5470BP | |
| 5485 | transposase | |||
| 8535 | conjugal transfer protein TraD | |||
| 8540 | S | 104 aa hypothetical protein | S.Xga7493ORF8545P | |
| 8545 | RM | Xeu83MORF2110P (98% identity) | Xga7493ORF8545P | |
| 8550 | 132 aa hypothetical protein | |||
| 12395 | 162 aa hypothetical protein | |||
| 12400 | RM | Xga8129ORF25560P (100% identity) | Xga7493ORF12400P | |
| 12405 | S | S.Xga8129ORF25560P (100% identity) | S.Xga7493ORF12400P | |
| 12410 | 0 aa hypothetical protein | |||
| 17115 | phage portal protein | |||
| 17125 | M | M.Xga8129ORF16450P (100% identity) | M.Xga7493ORF17125P | |
| 17130 | 345 aa hypothetical protein | |||
| 22075 | IS30 family transposase | |||
| 22080 | V | V.XhoVT106ORF3340P (100% identity) | V.Xga7493ORF22085P | |
| 22085 | M | M.XhoVT106ORF3340P (100% identity) | CGATCG | M.Xga7493ORF22085P |
| 22090 | 276 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8885 | plasmid stabilization protein | |||
| 8890 | R | Xga8129MrrP (100% identity) | Xga7493MrrP | |
| 8895 | DEAD/DEAH box helicase | |||