Xanthomonas perforans LH3 |
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Putative Xanthomonas perforans LH3 RM systems
Ref: Richard,D. unpublished
REBASE ref # 23524
| Sequence length: | GenBank #: | |
| Chromosome: | 4,969,893 bp | CP018475 |
| plasmid pLH3.2: | 69,764 bp | CP018476 |
REBASE acronym: XpeLH3
Org_num: 22024
All begin BJD13_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10870 | 88 aa hypothetical protein | |||
| ??? | R | Xpe91118ORF6580P (99% identity) | XpeLH3ORF10890P | |
| 10885 | cell filamentation protein Fic | |||
| 10890 | M | M.Xpe91118ORF6580P (100% identity) | M.XpeLH3ORF10890P | |
| ??? | S | S1.XsaR1ORF635P (100% identity) | S.XpeLH3ORF10890P | |
| 10900 | 600 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11385 | 131 aa hypothetical protein | |||
| 11390 | R | Xpe91118ORF7080P (100% identity) | TGATCA | XpeLH3ORF11400P |
| 11395 | DNA-binding protein | |||
| 11400 | M | M.Xpe91118ORF7080P (100% identity) | TGATCA | M.XpeLH3ORF11400P |
| 11405 | conjugal transfer protein TraD | |||
| 20235 | phage portal protein | |||
| 20245 | M | M.Xpe91118ORF15875P (100% identity) | M.XpeLH3ORF20245P | |
| 20250 | hypothetical protein | |||
| plasmid pLH3.2 | ||||
| 23845 | pectate lyase | |||
| 23850 | R | Xci7112ORF22525P (100% identity) | CCGCGG | XpeLH3ORF23860P |
| 23855 | 76 aa hypothetical protein | |||
| 23860 | M | M.Xpe872ORF22170P (100% identity) | CCGCGG | M.XpeLH3ORF23860P |
| 23865 | CopG family transcriptional regulator | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17310 | 85 aa hypothetical protein | |||
| 17315 | R | Xpe872MrrP (100% identity) | XpeLH3MrrP | |
| 17320 | 283 aa hypothetical protein | |||