Escherichia coli S43 |
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Putative Escherichia coli S43 RM systems
Ref: Jiang,J. et al. unpublished
REBASE ref # 23554
Complete sequence: 5,043,711 bp
GenBank #: CP010237
REBASE acronym: EcoS43
Org_num: 21971
All begin RG71_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5840 | membrane protein | |||
| 5845 | R | EcoZ151ORF20685P (99% identity) | EcoS43ORF5850P | |
| 5850 | M | M.EcoC2159ORF19075P (100% identity) | M.EcoS43ORF5850P | |
| 5855 | S | S.EcoC2159ORF19075P (100% identity) | S.EcoS43ORF5850P | |
| 5860 | endoribonuclease SymE | |||
| 9355 | 191 aa hypothetical protein | |||
| 9360 | R | KpnS1651ORFBP (100% identity) | EcoS43ORF9365P | |
| 9365 | M | M.KpnS1651ORFBP (100% identity) | M.EcoS43ORF9365P | |
| 9370 | S | S.Eco49610ORF17760P (100% identity) | S.EcoS43ORF9365P | |
| 9375 | 529 aa hypothetical protein | |||
| 18650 | 388 aa hypothetical protein | |||
| 18655 | M | M.EcoSHP24ORF10835P (100% identity) | M.EcoS43ORF18655P | |
| 18660 | S | S.SenSMo01ORF8345P (97% identity) | S.EcoS43ORF18655P | |
| 18665 | 227 aa hypothetical protein | |||
| 18670 | R | Ecoa005ORF12540P (99% identity) | EcoS43ORF18655P | |
| 18675 | metal-dependent hydrolase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 165 | 273 aa hypothetical protein | |||
| 170 | M | M.Ype21801ORF197P (100% identity) | M.EcoS43ORF170P | |
| 175 | DNA-binding protein | |||
| 340 | nuclease | |||
| 345 | M | M.StypAKU1ORFCP (100% identity) | CCWGG | M.EcoS43ORF345P |
| 350 | 439 aa hypothetical protein | |||
| 4210 | 62 aa hypothetical protein | |||
| 4215 | R | Ecos81ORF18545P (100% identity) | YGGCCR | EcoS43ORF4220P |
| 4220 | M | M.PanLORF19300P (100% identity) | YGGCCR | M.EcoS43ORF4220P |
| 4225 | transposase | |||
| 6000 | RM | Eco425ORF1418P (99% identity) | EcoS43ORF6000P | |
| 6005 | helicase | |||
| 10930 | cell division protein DamX | |||
| 10935 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoS43DamP |
| 10940 | ribulose-phosphate 3-epimerase | |||
| 11585 | 59 aa hypothetical protein | |||
| 11590 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoS43ORF11590P |
| 11595 | Fis family transcriptional regulator | |||
| 18300 | hydrolase | |||
| 18305 | M | M.EcoMB46DcmP (100% identity) | CCWGG | M.EcoS43DcmP |
| 18310 | V | V.EcoSFE8DcmP (100% identity) | V.EcoS43DcmP | |
| 18315 | multidrug DMT transporter | |||
| 24100 | endonuclease | |||
| 24105 | M | M.SflP099ORF15630P (100% identity) | GATC | M.EcoS43ORF24105P |
| 24110 | 75 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4250 | transposase | |||
| 4255 | R | Ecos81ORF18685P (99% identity) | EcoS43ORF4260P | |
| 4260 | M | M.Ecos81ORF18685BP (62% identity) | M1.EcoS43ORF4260P | |
| 4265 | pseudogene | |||
| 4270 | M | M.EcoNIH5II (69% identity) | M2.EcoS43ORF4260P | |
| 4275 | 284 aa hypothetical protein | |||